Gene Information

Name : BTI_4020 (BTI_4020)
Accession : YP_007920481.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : putative ATP synthase SpaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 499106 - 500434 bp
Length : 1329 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGCCGCCGGCGATCCGCTGCGGCTCCTCGCGCGGCGTGCGCATCCGCGCCGCATCCAGGGGCCGATCATCGAGGC
GCCGCTGCCGGACGTCGCGATCGGCGAGCTGTGCGCGATCCGCGCGGCGGCGGGCAGCGACACGGTGATCGGCCGCGCGC
AGGTGGTGGGCTTCGGGCGCGACACCGCGATCCTGAGCACGCTCGGCAGCACGGCCGGGCTGTCGCGGCAGGTCGCGCTC
GTGCCGACGGGCGAGCGGATGACGATCGACGTCGCGCCGGCGATGCTCGGCGCGGTCGTCGACGCGACGGGCGGCATCGT
CGAGACGTTCGGCGCGAAGCGGGAGGCGGGGGCGGAGGGGGCGGCGCGCGCCGCGGCGCCGCGCCGCCGCGCGATCGACG
CCGCGCCGCCCGATTACGCGGCGCGGCGCCCGATCGAGCGGCGGCTCGCGACGGGCGTGCGCGCGATCGACGGGTTGCTC
ACGTGCGGCGTCGGCCAGCGCATCGGCATTTTCGCGGCCGCGGGCTGCGGCAAGACTTCGCTGATGAACATGATGATCGA
GCATGCGGCGGCCGACGTGTACGTGGTCGCGCTGATCGGCGAGCGCGGCCGCGAGGTGTCCGAGTTCGTCGAGCGGATGC
GGCGCTCGGGCAGCCGGGACCGGACGGTCGTCGTGTACGCGACGTCGGATCGCTCGTCGGTGGACCGCTGCAACGCGGCG
CTCGTCGCGACGACGATCGCCGAGTATTTCCGCGATCTCGGCTGCGACGTGATGCTGTTTCTCGACTCGATGACCCGCTA
CGCGCGCGCGCTGCGCGACCTCGCGCTCGCGACGGGCGAAGCGCCCGCGCGGCGCGGCTATCCGGCGTCGGTGTTCGAGC
AGTTGCCGCGCCTGCTCGAGCGGCCGGGGCGCACGGAAGCGGGGAGCATCACCGCGTTCTACACGGTGCTGCTCGAAAAC
GAAGAGGAGCCCGATCCGATCGGCGACGAGATCCGCTCGATCGTCGACGGTCACGTGTATCTGAGCCGGCAGCTCGGCGC
AAAGGGGCATTTCCCGGCGATCGACGTGCTGAGGAGCACGAGCCGTCTGTTCGACGAGATCGCGCACGCGCCGCATCGCG
CGGCCGCGATGCAGTTCCGGCGGCACCTCGCGCGCATCGACGAGATGCAGGTGTTTCTCGATCTCGGCGAGTACCGGCGC
GGCGAGAACCCGGAGAACGACGAGGCGCTCGACAGGCGGCCCGCGCTCGATGCGTTCCTGCAGCAGGCGATCGACGAGGC
GTCGGCGTTCGACGACACGCTCGAACGGATGCGCGAGGCCGCGTCATGA

Protein sequence :
MKAAGDPLRLLARRAHPRRIQGPIIEAPLPDVAIGELCAIRAAAGSDTVIGRAQVVGFGRDTAILSTLGSTAGLSRQVAL
VPTGERMTIDVAPAMLGAVVDATGGIVETFGAKREAGAEGAARAAAPRRRAIDAAPPDYAARRPIERRLATGVRAIDGLL
TCGVGQRIGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAA
LVATTIAEYFRDLGCDVMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLERPGRTEAGSITAFYTVLLEN
EEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSTSRLFDEIAHAPHRAAAMQFRRHLARIDEMQVFLDLGEYRR
GENPENDEALDRRPALDAFLQQAIDEASAFDDTLERMREAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-105 59
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-105 59
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-105 59
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-105 59
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-103 59
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-99 55
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-101 54
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-76 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-77 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-76 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-76 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-76 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-76 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-76 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-76 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-76 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-67 45
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-76 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-62 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-63 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-62 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-62 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-62 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-57 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-57 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-60 42
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-57 41
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-51 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-58 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-58 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-62 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 7e-62 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-67 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG2459 Protein 4e-160 91
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG0555 Protein 4e-105 59
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG1778 Protein 1e-97 55
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG1008 Protein 1e-97 52
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG0048 Protein 1e-75 46
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG0390 Protein 4e-76 45
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG0192 Protein 6e-76 44
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG0515 Protein 1e-62 43
BTI_4020 YP_007920481.1 putative ATP synthase SpaL VFG2144 Protein 8e-64 43