Gene Information

Name : epaR (BTI_4014)
Accession : YP_007920475.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 494690 - 495445 bp
Length : 756 bp
Strand : -
Note : fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT

DNA sequence :
ATGGATGTCTCGATGGAAGCGTTCTACCGGCAGGCCGGCGCGATCGCGATCGCGTATGCGCGCGTCGCGCCGGTGTTCTA
TCTGCTGCCGTTCCTGAATGACCGGACGATCGTCAACGGGGTCGTGAAGAACACGATCGTGTTCGCGGTCATTCTCGGGT
TGTGGCCGAGCTTCGCGCACCCGCATCTGCAAGGCGGCGCGCTCGCCGGCGTCGCGCTGACGGAGGCGGCGGCGGGCGTC
GTGCTCGGCGTCGCGCTGTCGCTGCCGTTCTGGGTCGCGACCGCGGTGGGCGAGCTGATCGACAACCAGCGCGGCGCGAC
GATCAGCGATTCGATCGATCCGGCCACGGGCGTCGAAGCGTCGGCGCTCGCGCCGTTCGTGAGCCTGTTCTACGCGGCCG
CGTTCCTGCAGCAGGGCGGCATGCTGACGATCGTCGGCGCGCTCGAATCGAGCTACGCGACGGTGCCGGCGGGCGCGCTG
TTTTCGGTCGATCTGCCGCGCGTCGGCGCGCTGCTGACCGATCTCGTCGCGCACGGGCTCGCGCTCGCCGCGCCCGTGCT
GATCGTGATGTTCCTGACCGATGCGCTGCTCGGGCTCTTCTCGCGCTTCTGTCCGCAGGTCAATGCGTTCTCGCTGTCGC
TGACGGTCAAGAGCATCGTCGCGTTCGCCGTGTTCCACCTGTATTTCCTCTATGCGGCCCCGCACGAGCTGACGGCGCTG
CTGCACGCGCATCCTTTCAGCGGCCTGGTGAAGTGA

Protein sequence :
MDVSMEAFYRQAGAIAIAYARVAPVFYLLPFLNDRTIVNGVVKNTIVFAVILGLWPSFAHPHLQGGALAGVALTEAAAGV
VLGVALSLPFWVATAVGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALESSYATVPAGAL
FSVDLPRVGALLTDLVAHGLALAAPVLIVMFLTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFLYAAPHELTAL
LHAHPFSGLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 3e-23 45
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-23 45
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-23 45
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 4e-21 44
ysaT AAS66848.1 YsaT Not tested SSR-1 Protein 3e-35 42
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_007920475.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG2453 Protein 6e-87 95
epaR YP_007920475.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1771 Protein 3e-35 47
epaR YP_007920475.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 1e-23 45