Gene Information

Name : spaS (BTI_4013)
Accession : YP_007920474.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein spaS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 493586 - 494686 bp
Length : 1101 bp
Strand : -
Note : -

DNA sequence :
ATGGCGGAGAAAACCGAAAAGCCGACCGCGAAGAAGCTGCGCGACGCGGCGAAGAAAGGGCAGACGTTCAAGGCAAGGGA
CATCGTCGCGCTCGTCGTGATCGCCACGGGCGCATTGGCCGCGCCCGCGCTCGTCGATCTGACGCGTATCGCGGCCGAAT
TCGCGCGGATCGCGTCGTCGGGCGCGCAGCCGGACCCGGGCGCCTACGCGTTCGCGTGGGCGAAGCTGTTCCTGCGGATC
GCCGCGCCGTTCGTGCTGCTCTGCGCGGCCGCGGGCGCGCTGCCGTCGCTCGTGCAAAGCCGCTTCACGCTCGCTGTCGA
ATCGATCCGCTTCGATCTCACGGCGCTCGATCCCGTCAAGGGAATGAAGCGGCTCTTCAGTTGGCGCTCGGTGAAGGACG
CGGCGAAGGCGCTGCTCTACGTCGCCGTGTTCGCGGTCACGGTGCGCGTGTTCGCCGATCTCTGCCACCACGACGTGTTC
GGGCTGTTCCGCGCGCGAGCGGCGCTGCTCGGCCACATGTGGATCGTGCTGACGATCCGGCTCGTGCTGCTGTTCCTGCT
GTGCGCGCTGCCCGTGCTGATCGTCGACGCCGCCGTCGAATACTACCTGTACCACCGCGAGCTGAAGATGGACAAGCACG
AGGTGAAGCAGGAATACAAGGAGAGCGAGGGCAATCACGAGATCAAGAGCAAGCGGCGCGAGATCCATCAGGAACTGCTG
TCGGAGGAGATCAAGGCGAACGTCGAGCAATCCGATTTCATCGTCGCGAATCCGACTCACATCGCGATCGGCATCTATGT
GAATCCGGACATCGTGCCGATTCCGTTCGTGTCGGTGCGGGAGACCAACGCGCGCGCGCTCGCGGTCATTCGGCACGCCG
AAGCGTGCGGCGTGACGGTCGTGCGCAACGTCGCGCTCGCGCGCTCGATCTATCGCAACTCGCCGCGCCGCTACAGTTTC
GTGAACCAGGACGACGTCGACGGCGTGATGCGCGTGCTGATCTGGCTCAAGGAAGTCGAGGCGGCGAATCGCGGTGGACC
GCCGCCCGGGATGGCGCCCGAGACGCCGCCCGGGCCGCAGGCGCGCGATCGAAACGCTTGA

Protein sequence :
MAEKTEKPTAKKLRDAAKKGQTFKARDIVALVVIATGALAAPALVDLTRIAAEFARIASSGAQPDPGAYAFAWAKLFLRI
AAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALDPVKGMKRLFSWRSVKDAAKALLYVAVFAVTVRVFADLCHHDVF
GLFRARAALLGHMWIVLTIRLVLLFLLCALPVLIVDAAVEYYLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQELL
SEEIKANVEQSDFIVANPTHIAIGIYVNPDIVPIPFVSVRETNARALAVIRHAEACGVTVVRNVALARSIYRNSPRRYSF
VNQDDVDGVMRVLIWLKEVEAANRGGPPPGMAPETPPGPQARDRNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaS YP_217806.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 3e-58 44
spaS NP_461808.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 3e-59 44
spaS NP_457281.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-59 44
spaS NP_806490.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 3e-59 44
spaS AAS66868.1 SpaS Not tested SSR-2 Protein 8e-52 43
ECs3721 NP_311748.1 surface presentation of antigens protein SpaS Not tested LIM Protein 3e-56 43
ysaU AAS66849.1 YsaU Not tested SSR-1 Protein 3e-56 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaS YP_007920474.1 surface presentation of antigens protein spaS VFG2452 Protein 3e-136 93
spaS YP_007920474.1 surface presentation of antigens protein spaS VFG1770 Protein 5e-54 45
spaS YP_007920474.1 surface presentation of antigens protein spaS VFG0548 Protein 1e-59 44
spaS YP_007920474.1 surface presentation of antigens protein spaS VFG1015 Protein 2e-57 41