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Name : BTI_4012 (BTI_4012) Accession : YP_007920473.1 Strain : Genome accession: NC_021174 Putative virulence/resistance : Virulence Product : type III secretion low calcium response chaperone LcrH/SycD Function : - COG functional category : - COG ID : - EC number : - Position : 492945 - 493460 bp Length : 516 bp Strand : - Note : lcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD DNA sequence : ATGACGCAACGCGACGTGAACATAGACGACATCGAAGCCGACGAGATGGCGGCGGCGCTGCTGGACGCGGTCCAGAACGG CGCGACGCTGAAGGACCTGCATCGGGTGCCGCAGGACCTGATGGACGGCATCTACGCGTTCGCGTACCGCTTCTACCAGC AGGGGCGGATCGACGACGCGGAGGTGTTCTTCCGTTTTCTGTGCATCTACGACTTCTATAACGCCGAATACGCGATGGGG CTCGCGGCGGTGTGCCAGTTGAAGAAGGAATACGCGCGGGCGATCGATCTGTATGCGCTCGCGTACTCGCTGTCGAAGGA CGACTACCGGCCGATGTTCCACACCGGCCAATGCCATCTGCTGATGGGCAAGGCGCCGCTCGCGCGGCGCTGCTTCGGCA TCGTCGCCGAGCGCTCGCGCGACGAGCGCCTCGCGCAGAAGGCGCAGTCCTATCTCGACGGGCTCGACGAAGTGGGCGCC GATGCGGCGCCCGCACCGGTCGAAAACGACCTCTAG Protein sequence : MTQRDVNIDDIEADEMAAALLDAVQNGATLKDLHRVPQDLMDGIYAFAYRFYQQGRIDDAEVFFRFLCIYDFYNAEYAMG LAAVCQLKKEYARAIDLYALAYSLSKDDYRPMFHTGQCHLLMGKAPLARRCFGIVAERSRDERLAQKAQSYLDGLDEVGA DAAPAPVENDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 8e-38 | 64 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-43 | 61 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-43 | 61 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-43 | 61 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-43 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BTI_4012 | YP_007920473.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG2451 | Protein | 7e-65 | 95 |
| BTI_4012 | YP_007920473.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG0547 | Protein | 5e-44 | 61 |
| BTI_4012 | YP_007920473.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG0988 | Protein | 1e-41 | 59 |
| BTI_4012 | YP_007920473.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG1769 | Protein | 1e-37 | 53 |
