Gene Information

Name : BTI_5546 (BTI_5546)
Accession : YP_007921980.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2402539 - 2403234 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAGTACTGATCGTCGAAGACGAAGCGAAAGTGGTCGATTACCTGAAGAGCGGCCTCGCCGACGAAGGCTGGGTCGT
CGATGCCGCGACCGACGGCGAGGAAGGCGCGTGGATGGCGGTCGAATACGACTACGACGTGGTCGTCCTCGACGTGATGC
TGCCGAAGCTCGACGGCTTCGGCGTGCTGCGCTCGCTGCGCGCGCACAAGGACACGCCCGTCATCATGCTGACCGCGCGC
GACCGCGTCGACGATCGCGTGCGCGGCCTGCGCGACGGCGCCGACGACTACCTGACGAAGCCGTTCTCGTTCCTCGAGCT
CGTCGAGCGGCTGCGCGCGCTGACGCGCCGCGCGCGCGTGCAGGAATCGACGTTGATCTCGATCGGCGACCTGCGCGTCG
ACCTGATCAGCCGCCGCGCGACGCGCAACGGCGTGCGGCTCGATCTCACCGCGCAGGAATTCCAGTTGCTCGGCGTGCTC
GCGCGCCGGCGCGGCGAGGTGCTGTCGAAGACGACGATCACCGAGCTCGTCTGGGACGTGAACTTCGACAGCAACGCGAA
CGTCGTCGAAACCGCGATCAAGCGGCTGCGCGCGAAGCTCGACGGCCCGTTCGCGGACAAGCTGCTGCACACGATCCGCG
GGATGGGCTACGTGCTCGAGGAACGCGCGGACGACGACGGGCAGGCGAAGCGATGA

Protein sequence : 
MKVLIVEDEAKVVDYLKSGLADEGWVVDAATDGEEGAWMAVEYDYDVVVLDVMLPKLDGFGVLRSLRAHKDTPVIMLTAR
DRVDDRVRGLRDGADDYLTKPFSFLELVERLRALTRRARVQESTLISIGDLRVDLISRRATRNGVRLDLTAQEFQLLGVL
ARRRGEVLSKTTITELVWDVNFDSNANVVETAIKRLRAKLDGPFADKLLHTIRGMGYVLEERADDDGQAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-37 49
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-36 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTI_5546 YP_007921980.1 response regulator BAC0125 Protein 2e-47 56
BTI_5546 YP_007921980.1 response regulator BAC0083 Protein 4e-41 55
BTI_5546 YP_007921980.1 response regulator BAC0197 Protein 3e-41 53
BTI_5546 YP_007921980.1 response regulator BAC0638 Protein 3e-33 52
BTI_5546 YP_007921980.1 response regulator BAC0308 Protein 1e-40 50
BTI_5546 YP_007921980.1 response regulator BAC0111 Protein 2e-41 50
BTI_5546 YP_007921980.1 response regulator BAC0347 Protein 1e-36 47
BTI_5546 YP_007921980.1 response regulator CP000675.2.gene1535. Protein 4e-26 41
BTI_5546 YP_007921980.1 response regulator NC_002952.2859905.p0 Protein 6e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTI_5546 YP_007921980.1 response regulator VFG0596 Protein 1e-37 49
BTI_5546 YP_007921980.1 response regulator VFG1389 Protein 2e-28 49
BTI_5546 YP_007921980.1 response regulator VFG1386 Protein 4e-24 43
BTI_5546 YP_007921980.1 response regulator VFG1390 Protein 3e-26 41