Gene Information

Name : copR (BTI_4999)
Accession : YP_007921445.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : transcriptional activator protein CopR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1742020 - 1742712 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGGTCCTCATCGTAGAAGACGAGCCGAAGACGGGCATGTATCTGAAGCGCGGGCTCACCGAAGCAGGCTTCGTCTG
CGACTGGACCCAGGATGGCATCAGCGGTCTGCACCAGTTGCAGACGGAGAACTACGATCTCGCGATCCTCGACGTGATGC
TGCCCGGCTGCGACGGCTGGACGGTCGTGCGCGAGCTGCGCAGAACGCACCGCACGCCGGTGCTGTTCCTCACCGCGCGC
GATCACGTCGACGATCGCGTGAAGGGCCTCGAGCTCGGCGGAGACGACTATCTCGCGAAACCGTTCGATTTCGCCGAGCT
GCTCGCGCGCGTGCGCTCGCTGCTGCGGCGCGGCCAGGCGACCGATGCGCCGGTGCTGCGCGTCGCGAATCTCGAGCTCG
ATCTCATCCAGCGCAAGGCCCGCCGCCAGGGCAACACGATCCTGCTCACCGCGAAGGAATTTCTGCTGCTGTGGCTGCTG
ATGCGCCGGCGGGGCGAGATCCTGCCGCGCTCGCTGATCGCATCGCAGATCTGGGACATCAACTTCGACAGCGATTCGAA
CGTCGTCGACGCGGCGATCAAGCGCGTGCGCGCGAAGGTCGATCAGGACTACGAGCCCAAGCTGATCCACACGGTGCGCG
GAATGGGCTACGTCCTCGAGCAGCGAGGCGAGCCGTGCGAATCGTGCGCATGA

Protein sequence : 
MKVLIVEDEPKTGMYLKRGLTEAGFVCDWTQDGISGLHQLQTENYDLAILDVMLPGCDGWTVVRELRRTHRTPVLFLTAR
DHVDDRVKGLELGGDDYLAKPFDFAELLARVRSLLRRGQATDAPVLRVANLELDLIQRKARRQGNTILLTAKEFLLLWLL
MRRRGEILPRSLIASQIWDINFDSDSNVVDAAIKRVRAKVDQDYEPKLIHTVRGMGYVLEQRGEPCESCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-57 58
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-56 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_007921445.1 transcriptional activator protein CopR BAC0197 Protein 1e-85 74
copR YP_007921445.1 transcriptional activator protein CopR BAC0083 Protein 1e-65 62
copR YP_007921445.1 transcriptional activator protein CopR BAC0111 Protein 3e-65 61
copR YP_007921445.1 transcriptional activator protein CopR BAC0638 Protein 3e-59 59
copR YP_007921445.1 transcriptional activator protein CopR BAC0125 Protein 5e-65 59
copR YP_007921445.1 transcriptional activator protein CopR BAC0308 Protein 3e-62 58
copR YP_007921445.1 transcriptional activator protein CopR BAC0347 Protein 5e-60 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_007921445.1 transcriptional activator protein CopR VFG0596 Protein 2e-57 58
copR YP_007921445.1 transcriptional activator protein CopR VFG1390 Protein 2e-38 42
copR YP_007921445.1 transcriptional activator protein CopR VFG1389 Protein 5e-32 42