Gene Information

Name : fliP (BTI_97)
Accession : YP_007916631.1
Strain :
Genome accession: NC_021173
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 116496 - 117257 bp
Length : 762 bp
Strand : -
Note : fliP: flagellar biosynthetic protein FliP

DNA sequence :
ATGAAAACCGCTTTCCCGCGCGGCGCGCTACGCTGGCTGCCCGCCATCCTGATCGGCTTGGCGCCCGCGCTCGCGTGCGC
GCAGGCGGCCGGCCTGCCGGCGTTCAACTCGGCGCCGGGCCCGAACGGCGGCACGACCTACTCGCTGAGCGTGCAGACGA
TGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGGATCATCATCGTGCTG
TCGCTGCTGCGGCAGGCGCTCGGCACCGCGTCGACGCCGCCGAACCAGGTGCTCGTCGGCCTCGCGCTCTTCCTCACGCT
GTTCGTGATGTCGCCCGTGCTCGACCGCGCCTACGCCGACGCGTACAAGCCGTTTTCCGAAGGCACGCTGCAGATGGACC
AGGCGGTGCAGCGCGGCGCCGCGCCCTTCAAGACGTTCATGCTGAAGCAGACGCGCGAGACCGATCTCGCGCTGTTCGCG
AAGATCTCGAAGGCCGCGCCGATGCAGGGGCCGGAGGACGTGCCGCTGTCGCTCCTCGTGCCCGCGTTCGTCACGAGCGA
GCTGAAGACGGGCTTCCAGATCGGCTTCACGATCTTCATCCCGTTCCTCATCATCGACATGGTCGTCGCGAGCGTGCTGA
TGTCGATGGGGATGATGATGGTCTCGCCCGCCACCGTGTCGCTGCCTTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGC
TGGCAATTGTTGATCGGCTCGCTCGCGCAGAGCTTCACCTAG

Protein sequence :
MKTAFPRGALRWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQALGTASTPPNQVLVGLALFLTLFVMSPVLDRAYADAYKPFSEGTLQMDQAVQRGAAPFKTFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLFVLVDG
WQLLIGSLAQSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 4e-27 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 9e-25 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-26 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 9e-28 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 7e-28 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 9e-28 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 6e-24 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 4e-24 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 6e-24 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-14 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-88 97
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-64 70
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG1259 Protein 5e-56 62
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-51 55
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG0394 Protein 2e-25 42
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG0519 Protein 2e-24 41
fliP YP_007916631.1 flagellar biosynthetic protein FliP VFG0188 Protein 5e-26 41