Gene Information

Name : BTI_2207 (BTI_2207)
Accession : YP_007918687.1
Strain :
Genome accession: NC_021173
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2403132 - 2403629 bp
Length : 498 bp
Strand : +
Note : -

DNA sequence :
ATGCTTGCTTCCTTCTCATGTGTCGATCGTCCATCGCTGACCTCATCCACCCTGACGTCAGCGGAACACCAACTCATCCA
GGATGCCATCGCGGTGCTGGAACGGCGTCTGTTCCAGCGCGGACCGGCGCTCACCCGCCCGCAGGAAGTGATCGATTACC
TGCGGCTCACCCTGACGCGAGAAGATCGCGAGGTTTTCACGGTGGTCTTTCTCGACACGCGTCATCGCGTGATCGCCGTG
GAGCCGCTGTTCTTCGGCACCATCGATGGCGCGCAAGTCGCGCCCCGCGTCATCCTGCATCGTGCGCTGCTTCTCAACAG
CGCCGCCCTCATCGCGGCCCACAATCATCCGTCGGGCACTACGGTGCCGAGCGACGCAGACCGCGTGTTGACCACCGAAC
TGACGGCCCTGCTCCGACGGGTCGATATCCGGTTGCTCGACCATTTCGTCATCGGTCAGGGCGAACCCTTTTCCTTTGCC
CAAGCGGGCCTGCTCTAA

Protein sequence :
MLASFSCVDRPSLTSSTLTSAEHQLIQDAIAVLERRLFQRGPALTRPQEVIDYLRLTLTREDREVFTVVFLDTRHRVIAV
EPLFFGTIDGAQVAPRVILHRALLLNSAALIAAHNHPSGTTVPSDADRVLTTELTALLRRVDIRLLDHFVIGQGEPFSFA
QAGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 3e-32 56
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 3e-32 52
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-21 47
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-21 47
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-21 47
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 6e-21 44
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-22 44
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-22 44
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 8e-22 44
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 2e-22 44
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 1e-21 44
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 1e-18 44
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 4e-21 43
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-21 43
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 2e-21 43
unnamed AAL08475.1 unknown Not tested SRL Protein 2e-21 43
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-21 43
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 5e-21 43
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 5e-21 43
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-21 43
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 3e-21 43
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 1e-21 42
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 2e-21 42
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 1e-19 42
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 2e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTI_2207 YP_007918687.1 hypothetical protein VFG1119 Protein 8e-22 47
BTI_2207 YP_007918687.1 hypothetical protein VFG1678 Protein 3e-22 44
BTI_2207 YP_007918687.1 hypothetical protein VFG1528 Protein 1e-21 43
BTI_2207 YP_007918687.1 hypothetical protein VFG1066 Protein 7e-22 43
BTI_2207 YP_007918687.1 hypothetical protein VFG0660 Protein 1e-21 43
BTI_2207 YP_007918687.1 hypothetical protein VFG1617 Protein 7e-21 42