|
Name : topB (BTI_2173) Accession : YP_007918653.1 Strain : Genome accession: NC_021173 Putative virulence/resistance : Unknown Product : DNA topoisomerase III family protein Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 2369252 - 2371282 bp Length : 2031 bp Strand : + Note : topB: DNA topoisomerase III family protein DNA sequence : GTGCGCCTCTTTCTGTGTGAGAAGCCTTCGCAGGGCAAGGACATCGCCCGCGTACTCGGTGCGAAGCAACGCGGCGATGG TTGCTTTCACGGTGACGCCATCACGGTCACCTGGTGCATCGGGCATCTCGTCGAGGCGGCCGAACCCGACGCCTACGGTG AGCAGTACAAGTCATGGTCCATCGATCAACTGCCGATCATCCCTGATCCGTGGCGCATCGAGATCAAGCCAAAGACGGCG GCGCAGTTAAAGATCGTCAAGGCGCTGATCGCGCAGGCCGACGAACTCGTCATCGCGACCGATGCCGATCGCGAAGGCGA AATGATCGCCCGCGAACTTCTCGAGTTATTCAGTTATCGCGGTCCCATTCAGCGGCTGTGGCTGTCGGCATTGAACGACG CATCGATCCGGCAGGCACTCGGCGCGCTGCGACCCGGTTCCGAGACGCTGCCGCTCTATCACGCCGCGCTGGCGCGTTCG CGCGCCGACTGGCTGGTCGGCATGAATCTCAGCCGCCTCTTCACGGTACTGGGGCGACAAGCCGGTTACGACGGTGTGCT GTCGGTCGGCCGTGTGCAAACACCGACGTTGCGCCTGGTCGTCGATCGTGATCGCGAGATCGCGCGCTTCGTGTCCGTGC CGTTCTGGACCATCGAACTGGCGCTCTCCTCGAACGGCCAGCGTTTCACCGCGCACTGGCAGGCGCCGGACGGCAGCACC GATGACGCCGGACGTTGCCTGCAGCAACCCGTGGCCCAAAGTGCGCTCGCGACGCTTCAGAACGCGCGCGACGTTGAAGT GATGTCCGTCGACACTGAACGCATGCGCGAAGCGCCGCCGCTGCCGTTCGACCTCGGCACGTTGCAGGAAACATGTTCGC GACAGCTTGGACTCGACGTCCAGGAAACGCTCGATATCGCACAGGCCCTCTACGAGACGCACAAGGCGACGACCTATCCA CGCACCGATTGCGGCTATCTTCCCGAAAGCATGCTGGCCGATGTTCCCACCATTCTCACGGCACTGGTGAGGACCGATCC CTCGTTGCTTCCATTGATCGCCACGCTCGATCCGACACAGCGCTCGCGTGCATGGAACGACGGAAAGATCACCGCGCACC ACGGCATCATCCCGACGCTGGAACCGGCCAACCTCGCCGCCATGTCCGACAAGGAACAAGCCGTCTACCGATTGATCCGT GCCCATTATCTGGCGCAGTTCCTGCCCCATCATGAGTTCGACCGCACCGTCGCGCAGTTCGCGAGTGGGCCGGAACGGCT GACTGCGACCGGCAAACAGATCGCGGTGATCGGCTGGCACAGCGTGTTGAATGAACCGGCATCGAACGAGGATACCGGCG ACGACAGCGAGTCGCCGCGCAGCCAAACCTTGCCGCCGCTGGAAAACGGTACACGCTGCGCGATGGAACAGGTCGAGCTC AAGGCACTCACCACGCAGCCACCGCGCCCGTACACGCAAGGCGAACTGATCAAGGCGATGAAGGGTGTCGCGAAACTCGT CAGCGATCCGCGCTTGAAACAGATCCTCAAGGACACGACCGGCATCGGCACCGAGGCCACGCGCGCCAGCATCATCCAAG GACTCATTGCCCGCGGCTATCTGCTCAAGAAAGGTCGCGCCGTGCGTGGGTCGGATGCGGCGTTCACGTTGATCGACGCG ATCCCGGCCGCGATTGCCGATCCCGGCACCACTGCAATCTGGGAACAGGCGCTCGAACGCATCGAAGCAGGTGACATGAC GCTCGACGCGTTCGTGACACGCCAAGCAACGTGGGTCACGCAGCTCGTGCAGCACTATGCGCAGACGACGCTGGCAATCA AGCTACCGCCATCGCCACCCTGTCCGCTGTGCGGCAGCACGATGCGACAGCGCACCAGTCAGCGCGGTCCATTCTGGTCC TGCACGCGTTACCCCGATTGCAAGGGCACCCTGCCCGTTGAAAAGTCCAAGACGAAACGTCGTGCCGCAGACACACCCCG CCGTGGCCACTCCTTCGGTCACGACGACTGA Protein sequence : MRLFLCEKPSQGKDIARVLGAKQRGDGCFHGDAITVTWCIGHLVEAAEPDAYGEQYKSWSIDQLPIIPDPWRIEIKPKTA AQLKIVKALIAQADELVIATDADREGEMIARELLELFSYRGPIQRLWLSALNDASIRQALGALRPGSETLPLYHAALARS RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLRLVVDRDREIARFVSVPFWTIELALSSNGQRFTAHWQAPDGST DDAGRCLQQPVAQSALATLQNARDVEVMSVDTERMREAPPLPFDLGTLQETCSRQLGLDVQETLDIAQALYETHKATTYP RTDCGYLPESMLADVPTILTALVRTDPSLLPLIATLDPTQRSRAWNDGKITAHHGIIPTLEPANLAAMSDKEQAVYRLIR AHYLAQFLPHHEFDRTVAQFASGPERLTATGKQIAVIGWHSVLNEPASNEDTGDDSESPRSQTLPPLENGTRCAMEQVEL KALTTQPPRPYTQGELIKAMKGVAKLVSDPRLKQILKDTTGIGTEATRASIIQGLIARGYLLKKGRAVRGSDAAFTLIDA IPAAIADPGTTAIWEQALERIEAGDMTLDAFVTRQATWVTQLVQHYAQTTLAIKLPPSPPCPLCGSTMRQRTSQRGPFWS CTRYPDCKGTLPVEKSKTKRRAADTPRRGHSFGHDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 74 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 71 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 64 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 8e-162 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-156 | 49 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-155 | 48 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-155 | 48 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-156 | 48 |
