Gene Information

Name : epaR (BTI_1909)
Accession : YP_007918393.1
Strain :
Genome accession: NC_021173
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2093315 - 2094100 bp
Length : 786 bp
Strand : -
Note : fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT

DNA sequence :
ATGACGGCCGCGATGGCCGGCGAATGGCTGCCGATGGTCGCGCTGTCGATGCTGCGCCCGCTCGGCGCGATGCTGCTGGT
GCCGGTGTTCAGTACCGGCACGCTCGGCGGCACGCTCGCGCGCAACGCGCTGGTATTGGCGATCTCGCTGCCGGTGCTCG
CCCTGCACGATCTGTGGCCCGCCGTCGACGGCGCGCGGTCGTGGGCCGCCTATCTGTGGCTTGCGTGCGGCGAACTGAGC
ATCGGCCTCGTGATCGGCTTCTGCGCGGCGGTGCCGTTCTGGGCGCTCGACATGGCGGGATTCCTGATCGACACGATGCG
CGGCGCCTCGATGGCGAGCGTGCTGAATCCCTTGCTCGGCCAGCAATCGTCGATGATGGGCGTCGTATTCTCGCAGGTGT
TCTCGCTGCTGTTCATGATGTTCGGCGGCTTTCATGCGCTGCTCGAAGCCCTCTACGCGTCCTACCTGACGCTGCCGCCC
GGCGCGGCGTTCCGCTTTCGACCGGCCGCGCTCGACTTTCTCGGCCAGCAATGGCAATTGATGTACACGCTGTGCCTGCG
CTTCGCGATGCCCGCGATCGTCGCGATCCTGCTGGTCGACATGGCGCTCGGGCTCGTCAATCGCTCGGCGCAGCAGCTCA
ATGTGTTCTTCGTCGCGATGCCGATCAAGAGCGCGTTTGCGCTGCTGCTGATGATCATCTGCGCGAACTTCGCGTTCCAA
CTGCCGCTCTCTGAAAGCCTTCGGCTCGTCGAGCACGCTGCCGCGCTGACGAACCGACTGCGATGA

Protein sequence :
MTAAMAGEWLPMVALSMLRPLGAMLLVPVFSTGTLGGTLARNALVLAISLPVLALHDLWPAVDGARSWAAYLWLACGELS
IGLVIGFCAAVPFWALDMAGFLIDTMRGASMASVLNPLLGQQSSMMGVVFSQVFSLLFMMFGGFHALLEALYASYLTLPP
GAAFRFRPAALDFLGQQWQLMYTLCLRFAMPAIVAILLVDMALGLVNRSAQQLNVFFVAMPIKSAFALLLMIICANFAFQ
LPLSESLRLVEHAAALTNRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 8e-46 49
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-37 42
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-37 42
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-37 42
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 8e-38 42
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_007918393.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0521 Protein 8e-38 42