Gene Information

Name : lysS (BTI_1354)
Accession : YP_007917851.1
Strain :
Genome accession: NC_021173
Putative virulence/resistance : Virulence
Product : lysine--tRNA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1473535 - 1475061 bp
Length : 1527 bp
Strand : -
Note : lysS_bact: lysine--tRNA ligase

DNA sequence :
ATGACCGAACCGACCCAACCGCAGGCCGCTGTCGCAGCGGACGAAAACCAGATCGTCGCGGAACGCCGCGACAAGCTGCG
CGCGCTGCGCGACCAAGGCATCGCCTATCCGAACGACTTCCAGCCGACGCACCGCGCGGCCGATCTGCAGACCGAATACG
CGGATGCCGACAAGGAAGCGCTCGAGGCGAAGCCGCTCGAAGTCGCGATCGCCGGCCGGATGATGCTCAAGCGCGTGATG
GGCAAGGCGAGCTTCGCGACGGTGCAGGACGGCTCGGGTCAGATCCAGTTCTTCGTGACGCCCGCCGACGTCGGCGCCGA
GACCTACGACGCGTTCAAGAAGTGGGACCTGGGTGACATCGTCGCCGCGCGCGGCGTGCTGTTCCGCACGAACAAGGGCG
AGCTGTCGGTGAAGTGCACGGAGCTGCGGCTGCTCACGAAGGCGCTGCGCCCGCTGCCCGACAAGTTCCACGGCCTCGCC
GACCAGGAAACGCGCTATCGCCAGCGCTACGTCGACCTGATCGTCACGCCCGAGACGCGCGCGACGTTCCGCGCGCGCAC
GAAGGCGATCGCGTCGATCCGCAAGTTCATGAGCGACGCCGAGTTCATGGAAGTCGAGACGCCGATGCTGCACCCGATCC
CGGGCGGCGCGGCCGCGAAGCCGTTCGTCACGCATCACAACGCGCTCGACATGCAGATGTTCCTGCGCATCGCGCCCGAG
CTTTACCTGAAGCGCCTCATCGTCGGCGGCTTCGAGCGCGTGTTCGAGATCAACCGGAATTTCCGCAATGAAGGCGTGTC
GCCGCGCCACAATCCGGAATTCACGATGATGGAGTTCTACGCCGCGTACACCGACTACCGCTGGCTGATGGATTTCACCG
AGCGCCTGATCCGCCAGGCGGCCGTCGACGCGCTCGGCACCGCGACGATCCAGTACCAGGGCCGCGAGCTCGATCTGGCG
AAGCCGTTCCATCGCCTGACGATCACGCAGGCGATCCAGAAGTACGCGCCGAACTACACGAACGGCCAGTTGTCGGACGA
CGCGTTCCTGCGCAGCGAACTGAAGCGCCTCGGCGTCGACGTCACGCAGCCGGCGTTCCTGAACGCCGGCATCGGCGCGC
TGCAGCTCGCGCTCTTCGAGGAAACCGCGGAAGCGCAACTGTGGGAGCCGACCTTCATCATCGACTACCCGATCGAAGTG
TCGCCGCTCGCGCGCGAATCGGACACGGTGACGGGCATCACCGAGCGTTTCGAGCTCTTCATCACCGGCCGCGAAATCGC
GAACGGCTTCTCGGAGCTGAACGATCCCGAAGACCAGGCCGCGCGCTTCAAGAAGCAGGTCGAGCAGAAGGACGCGGGTG
ACGAGGAAGCGATGTTCTTCGACGCCGATTACATCCGCGCGCTCGAATACGGGATGCCGCCGACAGGCGGCTGCGGGATC
GGCATCGACCGTCTCGTGATGCTGCTCACCGACAGCCCGACGATCCGCGACGTGCTGCTGTTCCCGCACCTGCGCCGCGA
GGACTGA

Protein sequence :
MTEPTQPQAAVAADENQIVAERRDKLRALRDQGIAYPNDFQPTHRAADLQTEYADADKEALEAKPLEVAIAGRMMLKRVM
GKASFATVQDGSGQIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFRTNKGELSVKCTELRLLTKALRPLPDKFHGLA
DQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPE
LYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIQYQGRELDLA
KPFHRLTITQAIQKYAPNYTNGQLSDDAFLRSELKRLGVDVTQPAFLNAGIGALQLALFEETAEAQLWEPTFIIDYPIEV
SPLARESDTVTGITERFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGI
GIDRLVMLLTDSPTIRDVLLFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-139 56
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-85 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_007917851.1 lysine--tRNA ligase VFG1668 Protein 2e-139 56