Gene Information

Name : HYPDE_27488 (HYPDE_27488)
Accession : YP_007913676.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 966773 - 967237 bp
Length : 465 bp
Strand : -
Note : COG0789 Predicted transcriptional regulators

DNA sequence :
ATGCGCGATCAGAATTCGGCGAAGCGCCTTCAGCGCGCCGAGTTGGCCCGGCGGACAGGCGCCAATCTCGAAACCGTGCG
CTACTACGAGAAGGTCGGCCTGCTCCCGCCACCACCGCGAACCGCCAGCGGCTATCGGAGCTATGACACGGCGCATGAAC
GCCGCCTCAGCTTCGTACTCAGGGCGCGGGAACTCGGATTCTCGCTCGAAGAGGTACGTGCCTTGTTGCGCCTGGTGGAC
GAGCGGGACCAGCCTTGTGCGGAGGCGAGTCAGCTCGCGGCAACTCACCTGGCGGACGTGCGAGCGAAGATCGCCGATCT
GAGACGGATGGAAGGCGTGCTGAAGGAGGTCGTCGCGCAATGCGGCGATGGGACGCGCCCGGATTGTCCGCTGATCGAAA
CGTTGTTTCGCGAAATACCAAGTCCGCAAGCCAAACCGCGGAAGCCCGCTGGCGGTAAAAGTTAG

Protein sequence :
MRDQNSAKRLQRAELARRTGANLETVRYYEKVGLLPPPPRTASGYRSYDTAHERRLSFVLRARELGFSLEEVRALLRLVD
ERDQPCAEASQLAATHLADVRAKIADLRRMEGVLKEVVAQCGDGTRPDCPLIETLFREIPSPQAKPRKPAGGKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 7e-22 46
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 1e-21 46
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 1e-20 44
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 2e-22 43
merR AGK07025.1 MerR Not tested SGI1 Protein 6e-21 43
merR AGK07083.1 MerR Not tested SGI1 Protein 6e-21 43
merR ACK44535.1 MerR Not tested SGI1 Protein 4e-21 43
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 4e-21 43
merR AFG30124.1 MerR Not tested PAGI-2 Protein 4e-21 43
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 5e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0688 Protein 8e-23 45
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0232 Protein 3e-21 44
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0687 Protein 3e-21 44
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0686 Protein 4e-22 43
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0683 Protein 1e-22 43
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0684 Protein 8e-23 43
HYPDE_27488 YP_007913676.1 MerR family transcriptional regulator BAC0689 Protein 9e-22 43