Gene Information

Name : HYPDE_27223 (HYPDE_27223)
Accession : YP_007913623.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional activator of copper-responsive regulon genes
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 923928 - 924455 bp
Length : 528 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence :
ATGATGAAGCCGTTGACCATCGGGGAGATTGCGCGGCAAGCGGCCGTCGGGATCGAGACGGTCCGCTTCTATGAGCGCCG
CGGCCTGATCGAGCAGCCGCCGAAGCCGAACGGTGCCGGTTTCCGTACTTACCCGCAGGAGACCGTAAAGCGTCTTCGCT
TCATTCAGCAGGCGCAGGATATCGGATTCTCGCTGCGCGAAATCCATGAGCTTTTGGCGCTCAAAACCGATCCGGAAAGC
GACTGTGGCGACGTAAAGGGTCGCGCGGTTGCGAAGCTCAAGGAGGTTCATGACAAGATTGGCAAGCTTCGCCGCATCGG
CGAGGCGCTCGAAGCGCTGATCGCCGTCTGCCCGGGCTGCGGACCGGTGAACGCCTGCTCGATCCTGGAAGCGCTCGACG
ACTCTCCATCGCAAGCGCCGGCACCACCCGAGCCGAGTCTCCGCAAGCGGGAACTTGCCGAACGATCGGCGCGATCGCGG
CAGGGACGCGCCCGGAATAAAAACGCAACTCAGAGGCCGATCAGATGA

Protein sequence :
MMKPLTIGEIARQAAVGIETVRFYERRGLIEQPPKPNGAGFRTYPQETVKRLRFIQQAQDIGFSLREIHELLALKTDPES
DCGDVKGRAVAKLKEVHDKIGKLRRIGEALEALIAVCPGCGPVNACSILEALDDSPSQAPAPPEPSLRKRELAERSARSR
QGRARNKNATQRPIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0081 NP_763636.1 hypothetical protein Not tested SCCpbp4 Protein 3e-22 41
unnamed BAB47646.1 orf2 Not tested Type-III SCCmec Protein 2e-22 41
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 3e-23 41
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_27223 YP_007913623.1 DNA-binding transcriptional activator of copper-responsive regulon genes BAC0680 Protein 3e-22 41