Gene Information

Name : HYPDE_26683 (HYPDE_26683)
Accession : YP_007913516.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Virulence
Product : type I restriction-modification system methyltransferase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 832265 - 834400 bp
Length : 2136 bp
Strand : +
Note : COG0286 Type I restriction-modification system methyltransferase subunit

DNA sequence :
GTGGCGAACGGCGATTTTGGGTGGATAGCAAATTTTATATGGGGCATCGCGGACGACGTCCTACGTGACCTGTACGTCCG
CGGCAAGTACCGCGACGTCATCCTTCCGATGACGGTCTTGCGGCGACTGGACGCCGTGCTCGAACCGACCAAGAAGGCCG
TGCTCGACATGAACGACAAGCTCGATAAGGCGAAGGTCACCAACAAGGACCAGCCGCTTCGACAGGCCGCCGGGCAGGCT
TTCTACAACACGTCGAAGTTCACGCTGCGGGATCTCAAGAACCGCTCGAGCCAGCAGCAGTTGCGCGCAGACTTCGAGGT
GTACCTCGAAGGCTTCTCGCCGAACGTGCAGGTGATCATCGAGAACTTCGAGTTCCGTAATCAGATTCCGCGGCTCTCGA
AGGCGGACGTACTGGGCACACTCATCGAAAAGTTCCTCGACCCGTCTATCAACTTGGGTCCGAACCCGGTGCTGAATGGC
GACGGATCAGTGAAGCATAAGGGCCTCGACAATCATGCGATGGGCACGGTGTTCGAAGAGCTCGTCCGGCGCTTCAACGA
AGAGAACAACGAGGAGGCCGGAGAGCACTGGACACCGCGCGACGGGGTGAAGCTTATGGCCGAGCTCATCTTCCGCCCGA
TCGCAGATAAGATCACGTCCGGCACGTATTTGCTCTACGACGGCGCGTGCGGCACTGGCGGCATGCTCACGGTTGCCGAG
GAGACCCTGCAGCAGCTTGCCAAAGAGCATGGCAAGGAAGTTTCCACGCACCTTTACGGACAAGAGATCAATGCCGAGAC
CTACGCGATCTGCAAAGCCGATCTTCTCGTGAAGGGCGAGGGCGAGCAGGCGGACAATATCATCGGCGGTCCGGAGTATT
CCACGCTGTCGAATGATGCGTTCCGGGCTCGCGAGTTCGACTTCATGTTGTCGAATCCCCCCTACGGCAAGAGCTGGAAG
AGCGACCTTGAGCGCATGGGCGGGAAAGATGGCTTGAAAGACCCGCGCTTTGTAATCGAACATGACGCTGACAGTGAGTA
TTCGCTGGTTACGCGTACCAGCGACGGCCAGATGCTTTTCCTCGCGAACATGCTGTCGAAGATGAAGCATGGGTCCAAGC
TCGGGAGCCGGATTGCCGAGGTTCATAACGGGTCATCGCTCTTCACCGGCGATGCCGGGCAAGGCGAGAGCAACATCCGG
CGCTGGATCATCGAGAACGACTGGCTCGAAGCGATTATCGCCCTGCCTCTGAACATGTTCTACAACACCGGCATCGCGAC
CTACATCTGGGTGCTTTCCAACAAGAAGCCGGCGAACCGCAAGGACAAGGTACAGCTCATCGATGCGACGAGCTGGTACA
AGCCCTTGCGCAAGAACCTCGGGAAGAAGAACTGCGAGCTGTCCGAGGACGATATCAAGCGGATTCTCGACACGTTTCTG
GCCTTCGAAGAGACGGCGCAGTCGAAGATTTTCCCGAACAAGGCATTCGGGTACTGGAAGGTGACGGTCGAGCGGCCGCT
TCGGCTCGCAGTCGATTTGGGTGAGACGAGGCGAAAACATTTTCGGGTTGCGTGCGTCGATGCGGGCGAAGAGCCGATGG
CGAACCTCATGGACGCGCTCGCGAAGTCAATCGGTGTGGGACCGCATACGAATTTCAACGCATTCAAAAAGAAGCTCGAA
GGACTCGCAGACGACAAGGGCGTGAAGCTCACGGCGAAGCGTGTGAAGCTGGTGCAGTCTGAACTCGCACAGCGCGACGA
GACAGCTGAGCCAGTGATCAAGAAAATTCATAAGAAGGGCGAAGCCGATCCGTTGCACGGCCTTTGCGACGTCAAGCTCG
ATGCCAAGGCTGCCATCGTCGAATACGAGCCGGACACGGAACTACGCGACACTGAACAAGTGTCTCTGCTCGAAGAGGGA
GGCATCCAAGCATTCATCGAAAGGGAAGTATTGCCGCACGCGAGCGACGCGTGGGTCGACAAGGACGCGACCAAGATCGG
GTACGAGATCAGCTTCAATCGGTACTTCTACAAACCGCAGCCGCTGCGCACGCTCGATGCGATTCGGGCGGATATAGTCG
CGCTCGAGAAGGAAACGGACGGACTCCTGGCCGAAATCATTGGAATGAAAAATTGA

Protein sequence :
MANGDFGWIANFIWGIADDVLRDLYVRGKYRDVILPMTVLRRLDAVLEPTKKAVLDMNDKLDKAKVTNKDQPLRQAAGQA
FYNTSKFTLRDLKNRSSQQQLRADFEVYLEGFSPNVQVIIENFEFRNQIPRLSKADVLGTLIEKFLDPSINLGPNPVLNG
DGSVKHKGLDNHAMGTVFEELVRRFNEENNEEAGEHWTPRDGVKLMAELIFRPIADKITSGTYLLYDGACGTGGMLTVAE
ETLQQLAKEHGKEVSTHLYGQEINAETYAICKADLLVKGEGEQADNIIGGPEYSTLSNDAFRAREFDFMLSNPPYGKSWK
SDLERMGGKDGLKDPRFVIEHDADSEYSLVTRTSDGQMLFLANMLSKMKHGSKLGSRIAEVHNGSSLFTGDAGQGESNIR
RWIIENDWLEAIIALPLNMFYNTGIATYIWVLSNKKPANRKDKVQLIDATSWYKPLRKNLGKKNCELSEDDIKRILDTFL
AFEETAQSKIFPNKAFGYWKVTVERPLRLAVDLGETRRKHFRVACVDAGEEPMANLMDALAKSIGVGPHTNFNAFKKKLE
GLADDKGVKLTAKRVKLVQSELAQRDETAEPVIKKIHKKGEADPLHGLCDVKLDAKAAIVEYEPDTELRDTEQVSLLEEG
GIQAFIEREVLPHASDAWVDKDATKIGYEISFNRYFYKPQPLRTLDAIRADIVALEKETDGLLAEIIGMKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 1e-114 46
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 1e-114 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_26683 YP_007913516.1 type I restriction-modification system methyltransferase subunit VFG1102 Protein 5e-115 46