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Name : HYPDE_40408 (HYPDE_40408) Accession : YP_007916249.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family protein Function : - COG functional category : - COG ID : - EC number : - Position : 3527956 - 3528633 bp Length : 678 bp Strand : - Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : ATGAAGATTCTCGTTATCGAGGACGAGGTGAAGACCGCGTCCACCTTGAAAAAGGGATTGGAAGAGAATGGATTTGTCGC CGACGTGGTGGAGAACGGCGAGGACGGCAGTCACCTTGCATATACCGGCCAATACGACGTGATTATTCTTGATGTCATGC TTCCAGGCCGCGACGGATGGACCATCATGGCGGACCTGCGCCGCCGTAGCGTGCAAACGCCGGTGCTGTTCTTGACCGCC CGGGACGCGGTTCACGACCGCGTCAAGGGACTGGAACTCGGCGCCGACGACTACCTTGTCAAGCCCTTTGCCTTCTCGGA GCTCCTTGCGCGCATACGCAGCATTCTCCGGCGCGGCGCCGTTGCTCGGAAGGCGCCCATTCTAAAGGTCGCTGACCTCG AGATTGATCTCCATCGGCATCGCGCAACGCGCGCTGGCCGCTCTCTGGAGCTGACACCAAAGGAGTTCCTGATGCTGTCG CTCTTAATGCGACGCGCAGGCGATGCACTGTCTCGGTCGCTGATCGCCGAACAGGTATGGGATATCAATTTTGATTGCGA CTCCAATGTCGTCGATGTTCATATGCGCCGTCTCCGCTCAAAGGTTGATGATCCCTACGGAAGCAAGTTGATCCATACGG TCCGCGGCATCGGCTATGTACTCGAAAAGCGAGCCTAA Protein sequence : MKILVIEDEVKTASTLKKGLEENGFVADVVENGEDGSHLAYTGQYDVIILDVMLPGRDGWTIMADLRRRSVQTPVLFLTA RDAVHDRVKGLELGADDYLVKPFAFSELLARIRSILRRGAVARKAPILKVADLEIDLHRHRATRAGRSLELTPKEFLMLS LLMRRAGDALSRSLIAEQVWDINFDCDSNVVDVHMRRLRSKVDDPYGSKLIHTVRGIGYVLEKRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 7e-55 | 54 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-54 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0197 | Protein | 3e-68 | 65 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0125 | Protein | 5e-64 | 62 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0083 | Protein | 2e-63 | 59 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0638 | Protein | 2e-56 | 57 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0308 | Protein | 2e-60 | 56 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0111 | Protein | 4e-62 | 56 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | BAC0347 | Protein | 2e-57 | 55 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_013450.8614146.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002951.3238224.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_007793.3914065.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002758.1121390.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_010079.5776364.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002952.2859858.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_007622.3794948.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_003923.1003417.p0 | Protein | 6e-34 | 42 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002952.2859905.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002745.1124361.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_009782.5559369.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002951.3237708.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_002758.1121668.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_009641.5332272.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_013450.8614421.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_007622.3794472.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_007793.3914279.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | NC_003923.1003749.p0 | Protein | 2e-33 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | AE016830.1.gene1681. | Protein | 4e-38 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | AE000516.2.gene3505. | Protein | 7e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | VFG0596 | Protein | 3e-55 | 54 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | VFG0473 | Protein | 1e-36 | 41 |
| HYPDE_40408 | YP_007916249.1 | two component transcriptional regulator, winged helix family protein | VFG1386 | Protein | 1e-37 | 41 |
