Gene Information

Name : HYPDE_40323 (HYPDE_40323)
Accession : YP_007916232.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Resistance
Product : heavy metal resistance transcriptional regulator HmrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3508127 - 3508531 bp
Length : 405 bp
Strand : -
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGGCTCCAGAGTTTGTGACGATCGGTGAGCTCGGCAAGCTCACAGAGACGAAAATCGAGACGATCCGCTACTATGAGCG
GATCGGCCTCCTACCGCCGCCGGCGCGCACAAGCAGCAATTACCGCGTCTATTCCGACGATCAGGTCGGACGACTGAGCT
TTGTCCGCCGGGCCAGGGATCTGGGTTTCACGATCGATGAAGTCCGTGAGCTCCTGAGCCTTTCAGACCAGAAAAATCGA
TCCTGCGGGGCAGTGGATGCGATCGCCCGTCAGCACCTTTCCGACGTTGATCGCAAGATCGCTGACCTGACAGCATTGCG
GAGAGAGCTCGACAGCATCATCGGCCAGTGTAGTTGCGGCACCATCGCCGAATGCCGGATCATTGAGGCACTCTCGCCTG
TATAG

Protein sequence : 
MAPEFVTIGELGKLTETKIETIRYYERIGLLPPPARTSSNYRVYSDDQVGRLSFVRRARDLGFTIDEVRELLSLSDQKNR
SCGAVDAIARQHLSDVDRKIADLTALRRELDSIIGQCSCGTIAECRIIEALSPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_40323 YP_007916232.1 heavy metal resistance transcriptional regulator HmrR BAC0058 Protein 6e-26 45
HYPDE_40323 YP_007916232.1 heavy metal resistance transcriptional regulator HmrR BAC0682 Protein 4e-22 42
HYPDE_40323 YP_007916232.1 heavy metal resistance transcriptional regulator HmrR BAC0569 Protein 8e-25 41
HYPDE_40323 YP_007916232.1 heavy metal resistance transcriptional regulator HmrR BAC0301 Protein 1e-21 41
HYPDE_40323 YP_007916232.1 heavy metal resistance transcriptional regulator HmrR BAC0190 Protein 2e-29 41