Gene Information

Name : hslU (HYPDE_40093)
Accession : YP_007916186.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3474402 - 3475712 bp
Length : 1311 bp
Strand : -
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGACCAACTTCTCTCCCCGCGAAATCGTTTCCGAACTCGATCGCTATATCGTCGGACAGAACGACGCCAAGCGCGCCGT
CGCAATTGCCTTGCGCAACCGCTGGCGACGCCAGCAGCTGACCGGAGAGCTGCGCGAGGAAGTCCTGCCGAAAAACATTC
TGATGATCGGACCGACGGGTGTCGGCAAAACCGAAATCTCGCGACGTCTCGCGAAGCTCGCTGGCGCGCCGTTCCTGAAA
GTCGAAGCCACGAAATTCACCGAGGTTGGCTACGTTGGCCGCGACGTCGACAGCATCATCCGCGACCTCGTCGAAGTCGG
GATCTCACTCGTCAAGAACGTCAAGCGCCAAGAGGTCCGCGCACGCGCCGAAAAGGCCGCTGAGGAACGCGTGATCGACG
CGCTCGTCGGCAGCGGATCGTCGCTCGCAACGCGCGAAAGCTTCCGCAAGAAGCTGCGCAACAACGAATTGAACGACAAG
GAGATCGATATCCTCGTCGCCGATACGGCTCCGCAGATGCCGATGTTCGATCTTCCCGGCGGCGGTTCGATGTCGACGAT
CAATCTCGGCGATATGCTGGGCAAAGCGTTCGGCCAGCGAACGAAGCCGCGCCGCGTCACGGTCAGAGACAGTTTCGAGA
TCTTGATCGCAGATGAAAGCGACAAGCTGATCGATAACGATCAGATCACGGCCGAAGCCGTAACCTCGGTTCAGAACAAC
GGCATCGTTTTCCTCGACGAGATCGACAAGATCTGCTCGCGCGGCGATGGCACGCGGGCCGGCGGCGCGGACGTCTCCCG
CGAAGGCGTGCAGCGCGACCTCCTCCCGCTCATCGAAGGGACGACAGTTACGACAAAGCACGGCCCGGTAAAAACGGACC
ATATCCTGTTTATTGCATCAGGCGCATTTCACGTCTCGAAGCCGTCCGATCTTCTTCCCGAATTGCAGGGCCGCCTGCCA
ATCCGCGTCGAACTCAATGCGCTGACGCGAGACGACATGAAGCGCATCCTGACGGAGCCGCAGGCGAGCCTGATCAAGCA
GTACGTCGCGTTGATGGAAACGGAAGGCGTAGCGCTCGAGTTCAGGTCCGATGCGATCGACGCCATCGCCGATGCCGCCG
TTGAGGTGAATTCGACTGTCGAAAACATCGGCGCGCGCCGCCTGCAGACGGTTCTGGAGCGCGTCCTGGACGACATCTCG
TTCGAGGCGTCCGACCGCAGCGGCCAAGCACTCGCAATCGATGGCGCCTACGTGACCGAACGCGTTGGCCAGCTTTCCAA
AAATGCCGACCTGAGCCGATTTATCTTGTAA

Protein sequence :
MTNFSPREIVSELDRYIVGQNDAKRAVAIALRNRWRRQQLTGELREEVLPKNILMIGPTGVGKTEISRRLAKLAGAPFLK
VEATKFTEVGYVGRDVDSIIRDLVEVGISLVKNVKRQEVRARAEKAAEERVIDALVGSGSSLATRESFRKKLRNNELNDK
EIDILVADTAPQMPMFDLPGGGSMSTINLGDMLGKAFGQRTKPRRVTVRDSFEILIADESDKLIDNDQITAEAVTSVQNN
GIVFLDEIDKICSRGDGTRAGGADVSREGVQRDLLPLIEGTTVTTKHGPVKTDHILFIASGAFHVSKPSDLLPELQGRLP
IRVELNALTRDDMKRILTEPQASLIKQYVALMETEGVALEFRSDAIDAIADAAVEVNSTVENIGARRLQTVLERVLDDIS
FEASDRSGQALAIDGAYVTERVGQLSKNADLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 7e-86 46