Gene Information

Name : HYPDE_39633 (HYPDE_39633)
Accession : YP_007916094.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3389162 - 3389917 bp
Length : 756 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence :
ATGACAAAATCCGTCATCCGCACCGAGCAAGGCAACCAAAGTTTGAACGAACCCATCATCCAGCTCGACGATGTGCATCT
GACTCTGACGAGCAAAGCCGGCCCGGTACATATCCTGCGCGGCATCTCGATCGGCATTCCTGCCGGTCAGCCTGCGGCGA
TCGTAGGACCGTCGGGCTCCGGAAAAACTTCGCTCCTGATGGTGATGGCAGGCCTAGAACGCGCGAGTAGCGGCACGGTC
GCAATCGCCGGTCGCGAGCTGACGCGATTGTCTGAAGATGACCTCGCCGTGCTTCGTGGGGCCGAGATGGGAATTATCTT
CCAATCGTTTCACCTCGTCCCGACGATGACCGCGCTTGAGAACGTCGCCTTGCCGATGGAGCTTGCAGGCGAGAGCGACG
CCTATAAAAACGCGCGCGAGCTTTTACAGGAAGTCGGCCTCGCGGCGCGCACCGAGCACTATCCCGCTGAGCTTTCAGGC
GGCGAGCAACAGCGCGTCGCCATTGCCCGTGCTCTGGTTCGCGAACCGCGCATTATCTTTGCCGACGAGCCGACCGGCAA
TCTCGACGGCCGCACCGGTCGCCAGATTATCGATCTCCTTTTCGGTTTGCGTCGGCGCCGCAACGCAACGCTCGTGATCG
TCACGCATGACGATCATCTGGCCGGTATGGCGGACCGGATCATTCGCATGTCCGATGGTTCGGTTGCCTCTGACGAATCG
ATCGGATCCTCGGCAGTTCGTGCGGTATCGCCGTGA

Protein sequence :
MTKSVIRTEQGNQSLNEPIIQLDDVHLTLTSKAGPVHILRGISIGIPAGQPAAIVGPSGSGKTSLLMVMAGLERASSGTV
AIAGRELTRLSEDDLAVLRGAEMGIIFQSFHLVPTMTALENVALPMELAGESDAYKNARELLQEVGLAARTEHYPAELSG
GEQQRVAIARALVREPRIIFADEPTGNLDGRTGRQIIDLLFGLRRRRNATLVIVTHDDHLAGMADRIIRMSDGSVASDES
IGSSAVRAVSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-37 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_39633 YP_007916094.1 ABC transporter NC_008702.1.4606598. Protein 2e-35 46
HYPDE_39633 YP_007916094.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 44
HYPDE_39633 YP_007916094.1 ABC transporter NC_012469.1.7686878. Protein 2e-38 41
HYPDE_39633 YP_007916094.1 ABC transporter NC_012469.1.7685735. Protein 4e-37 41