|
Name : HYPDE_39203 (HYPDE_39203) Accession : YP_007916009.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 3301409 - 3302086 bp Length : 678 bp Strand : - Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : ATGCGAATCTTGCTGCTTGAGGATGATGCCAATACGGCGGCCTACGTTTCGAAGGGCCTCGAGGAAGAAGGTCACACCGT CGATCACCTGGCCGACGGTCGCGACGCCGTCGCACAGGCCATAGGCGAAGATTACGACGTCATCATTCTCGATCGCATGC TGCCGGGTCTCGATGGCTTGGCGATCATCAAGACCATTCGCAGCGCCGGACGCCGGGTGCCGGTGCTGTTCCTGACGGCG CTTGGCGGTGTCGACGACCGTGTCGAGGGTCTCGATGCGGGCGGTGACGACTATCTCGTCAAACCTTTTGCTTTTTCGGA GCTGCTCGCGCGCGTCAATGCGCTCGCGCGTCGTCCGCATACCAAAGGCGAGGAGACGAGGCTCAAGGTCGGCGATCTGG AGATTGACCTCGTCAGCCGCAAGGTGACGCGCGGCGGCGATATGATCGATCTGCAGCCGCGCGAGTTCCGGTTGCTCGAA GTCCTCATGCGTAACCGCGGTCGTGTCGTGACGCGGACGATGCTGCTCGAGCGCGTGTGGAGTTTCCATTTCGATCCCAA GACAAGCGTCGTCGAAACGCACATCTCGCGTCTCCGTGCAAAGATCGATAAGCCCTATGGCAAGGAGCTCATTCATACGA TCCGCGGCAGCGGCTACACCGTGAACGATGGTGCTTGA Protein sequence : MRILLLEDDANTAAYVSKGLEEEGHTVDHLADGRDAVAQAIGEDYDVIILDRMLPGLDGLAIIKTIRSAGRRVPVLFLTA LGGVDDRVEGLDAGGDDYLVKPFAFSELLARVNALARRPHTKGEETRLKVGDLEIDLVSRKVTRGGDMIDLQPREFRLLE VLMRNRGRVVTRTMLLERVWSFHFDPKTSVVETHISRLRAKIDKPYGKELIHTIRGSGYTVNDGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-45 | 47 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 1e-44 | 46 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 2e-33 | 42 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0083 | Protein | 2e-57 | 53 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 1e-54 | 52 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0347 | Protein | 7e-54 | 50 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0197 | Protein | 1e-50 | 49 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0638 | Protein | 9e-51 | 49 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 2e-53 | 47 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | BAC0308 | Protein | 2e-49 | 45 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 3e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | VFG0596 | Protein | 5e-46 | 47 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 6e-39 | 42 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | VFG1702 | Protein | 7e-34 | 42 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 2e-35 | 42 |
| HYPDE_39203 | YP_007916009.1 | winged helix family two component transcriptional regulator | VFG1563 | Protein | 6e-33 | 41 |
