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Name : HYPDE_37438 (HYPDE_37438) Accession : YP_007915658.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 2953394 - 2955025 bp Length : 1632 bp Strand : + Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component DNA sequence : ATGGCCAACACCACTCCACTCGTCGACGTGCGCAATCTCTCAGTCGCTTTTGGCGACGGCGCGGATGACGTGCGCGTCGT CAAAGGCGTCTCTTTCCATATCGGCAAGGGCGAGATCGCTGCGCTCGTCGGGGAATCGGGCTCCGGCAAGACCGTCTCGG CGATGTCGATCCTGCAACTTCTTCCGACATCCGCGTCGTATCCGACAGGCGAAATCCTGTTCGAAGGCAAGGATATCCTG AAAGCCACCGAAGCGCAGTTGCGCGGCATCCGGGGCAAGCGGATTTCGATCATCTTCCAGGAGCCGATGACGACGCTCAA TCCGCTGCACACGATCGAGGTGCAGGTGGGCGAGATCATCAAGCTGCACCAGAAACTTTCCGACAGCGATACGCGTGAAC GGGTCGTCGAGCTTTTGACCAAGGTCGGCATCCGCGATCCGGAAAAACGGCTTTCCGCTTATCCGCACCAGCTGTCCGGC GGCCAGCGCCAGCGCGTGATGATCGCGATCGCCCTTGCCAACCAGCCCGATCTTCTCATCGCGGACGAACCGACGACGGC ACTCGATGTCACGATCCAGGCGCAAATTCTGGAGCTCTTGAAGGCGCTGCAGAAAGAGATGGGCATGGCGATGCTGCTGA TCACGCATGATCTCGGCATCGTCCGGCGCATGGCCGAGCGCGTCTATGTCATGAAGAGCGGTGAAATCGTCGAGACGGGA AATACGGAAGCGGTTTTCACGTCTCCGAAGCACCCCTATACGCGGCATCTGATCGAAGCCGAGCCCAAGGGCGAGCCGCC TGCTGTCGACACCTCCCGCCCCGTCGTCGTCGAGACGGATAATCTCAAGGTCTGGTTTCCGATCAAGCACGGGCTGCTGA AAAGGACGGTCGATTACGTCAAGGCGGTCGACGGGCTTTCGATGAAGGTCCGCGCGGGCGAGACGCTGGGCGTTGTCGGA GAATCCGGATCGGGCAAGACGACACTCGGGCTGGCGATCCTGCGACTGCTCTCGTCCGAAGGGCCGATCGCCTACGTCGG CAAGCGCATCGACAGTCTCAACAGCAAACAGATGCGGCCGCTGCGCAAGGAAATGCAGATCGTTTTCCAGGACCCTTACG GGTCGCTGTCGCCGCGTTTGACGATCGAACAGATCATCGAAGAAGGTCTTCTGATCCAGAATCCGGAACTCGATGAGGAC GGCCGGAGCGAGCGCGTCGCAACGGCACTCCAGGAAGTCGGGCTCGATCCCGCAACCCGCGACCGCTATCCGCACGAGTT CTCGGGCGGACAGCGCCAGCGCATCGCCATTGCACGGGCCATGGTCTTGCAACCGAAGTTCGTCATGCTCGATGAGCCGA CGAGCGCGCTCGACATGAGCGTGCAAGCGCAGATCGTCGATCTCCTGCGCGACCTGCAGAGAAAGCGCGATCTCGCCTAT CTGTTCATCAGCCACGACCTCAAAGTCGTCAGAGCGTTATGCAACTACGTTATCGTGATGAAAAACGGTAAGGTCGTCGA GGAAGGTCCGGCGCGGGAAATCTTCGATTATCCGAAAGACGACTATACGAAGGCCCTGCTCGCCGCGGCGTTCGACATCA AGGTCACGCATCGCGCGGCGCTCGCGACGTAA Protein sequence : MANTTPLVDVRNLSVAFGDGADDVRVVKGVSFHIGKGEIAALVGESGSGKTVSAMSILQLLPTSASYPTGEILFEGKDIL KATEAQLRGIRGKRISIIFQEPMTTLNPLHTIEVQVGEIIKLHQKLSDSDTRERVVELLTKVGIRDPEKRLSAYPHQLSG GQRQRVMIAIALANQPDLLIADEPTTALDVTIQAQILELLKALQKEMGMAMLLITHDLGIVRRMAERVYVMKSGEIVETG NTEAVFTSPKHPYTRHLIEAEPKGEPPAVDTSRPVVVETDNLKVWFPIKHGLLKRTVDYVKAVDGLSMKVRAGETLGVVG ESGSGKTTLGLAILRLLSSEGPIAYVGKRIDSLNSKQMRPLRKEMQIVFQDPYGSLSPRLTIEQIIEEGLLIQNPELDED GRSERVATALQEVGLDPATRDRYPHEFSGGQRQRIAIARAMVLQPKFVMLDEPTSALDMSVQAQIVDLLRDLQRKRDLAY LFISHDLKVVRALCNYVIVMKNGKVVEEGPAREIFDYPKDDYTKALLAAAFDIKVTHRAALAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-95 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-82 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 42 |
