Gene Information

Name : HYPDE_34038 (HYPDE_34038)
Accession : YP_007914979.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2267524 - 2268933 bp
Length : 1410 bp
Strand : +
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGAAGAACGCAAGTGACGTCCTTAAATTCATCAAGGACAAGGAAGCCAAGTTCGTGGATTTCAGGTTCACGGACACTAA
AGGCAAAATGCAGCACGTGACTGCGGACGTCAGTTGCATTGACGACAGCGTGTTCAGCGACGGCTATGCCTTCGACGGCT
CGTCGATCGCAGGTTGGAAGTCGATCGAAGCGTCCGACATGACGTTGATGCCCGATCCGACCTCGGCACACGTCGACCCA
TTCTTCGCGCAGACGACGGTTGCGCTCTTCTGTGACGTTCTCGAGCCTTCGACGGGCCAGCCCTATGAACGCGACCCGCG
CTCGATCGCCAAGAAGGCGGAGGCCTACATGATGTCGCTCGGCCTCGGCGACAAAGTCTACTTCGGCCCGGAAGCCGAGT
TCTTCATCTTCGACGACGTCAGATTTTCGACCGACATGTACTCGGTCGGGTTCAAGGTCGACTCGAGCGAGCTGCCGACA
AATTCGTCAGCCGATATCGAGATGGGCAACCTCGGCCACCGTCCGCGCGTCAAGGGCGGCTATTTCCCGGTTCCGCCGAT
CGACAGCTGCCAGGACATCCGCTCCGAGATGCTCTCTGTGATGTCGGAGATGGGCGTTGCCGTCGAAAAGCACCACCACG
AAGTCGCTGCCGCCCAGCACGAACTCGGCGTCAAATTCGGCCCGATGATCACGATGGCCGACCATATGCAGATCTACAAA
TACGTCGTGCACAACGTGTCTCAGGCCTACGGCAAAACGGCGACGTTCATGCCGAAGCCGATATTCGGCGACAACGGATC
GGGTATGCACGTCCACCAGTCGATCTGGAAGGGCGGACAGCCGATGTTCGCCGGCGACAAGTATGCCGACCTCTCGCAGA
TGTGCCTCTACTACATCGGCGGCATCCTGAAACACGCCAAGGCCATCAACGCCTTCACGAACCCGCTGACGAACTCCTAC
AAGCGTCTCGTCCCCGGTTATGAAGCGCCGGTGCTGCTCGCCTATTCGGCGCGCAATCGTTCGGCATCGTGCCGCATCCC
GCACGTTTCGAACCCGAAGGCGAAGCGCATCGAAGTTCGCTTCCCGGATCCGGGTGCCAACCCCTACTTCGCATTTACCG
CGATGCTGATGGCGGGCCTCGACGGCATCCAGAACAAGATCGATCCGGGTCCCGCCATGGACAAGAACCTCTACGATCTG
CCGCCGGCGGAACTCGCTAAGATCCCGACCGTTGCCGCATCGCTGCGCGAAGCACTCGACAGCCTCGATAAGGATCGCGA
TTTCCTCAAGGCGGGCGGCGTCATGAACGACGACATGATCGACGCGTACATCGCGCTGCGTATGGAAGAGAACATGCGCT
ACGAGATGACGCCACATCCGGTCGAGTACGACATGTACTATTCGGTCTGA

Protein sequence :
MKNASDVLKFIKDKEAKFVDFRFTDTKGKMQHVTADVSCIDDSVFSDGYAFDGSSIAGWKSIEASDMTLMPDPTSAHVDP
FFAQTTVALFCDVLEPSTGQPYERDPRSIAKKAEAYMMSLGLGDKVYFGPEAEFFIFDDVRFSTDMYSVGFKVDSSELPT
NSSADIEMGNLGHRPRVKGGYFPVPPIDSCQDIRSEMLSVMSEMGVAVEKHHHEVAAAQHELGVKFGPMITMADHMQIYK
YVVHNVSQAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGQPMFAGDKYADLSQMCLYYIGGILKHAKAINAFTNPLTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPHVSNPKAKRIEVRFPDPGANPYFAFTAMLMAGLDGIQNKIDPGPAMDKNLYDL
PPAELAKIPTVAASLREALDSLDKDRDFLKAGGVMNDDMIDAYIALRMEENMRYEMTPHPVEYDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-100 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_34038 YP_007914979.1 glutamine synthetase VFG1399 Protein 8e-103 50