Gene Information

Name : HYPDE_31863 (HYPDE_31863)
Accession : YP_007914546.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator in two-component regulatory system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1844095 - 1844760 bp
Length : 666 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATTCTTGTCGTCGAAGACGAGCCGAAGATCCTGCATAGCGTGGTGACGGCGTTGACGGCCGCCAATTATAACAC
CGACGCCGCAAGGGATGGCGAAACGGCCTGGTTCCGCGGCGACACTGAAGACTACGATCTTGTCATCCTCGATCTTGGCT
TACCGAAAATGGATGGGCTTTCGGTACTCAAGCGTTGGCGCGCCGCCGGCAAGATGATGCCGGTTCTCGTGCTTACTGCG
CGCGGTGCCTGGTCCGAGCGTGTCGACGGCATCGATGCCGGCGCCGACGACTATCTGACAAAGCCCTTTCACGTTGAAGA
ATTGATGGCCCGCGTGCGGGCGCTCATCCGTCGCTCCGTCGGGTATGGATCGCCGGTCATCGAAGCGGGCGCGCTGACGC
TCGATACCCGGCAGATGCGTGTCTCGCTCAATGGGGCGCAGATTTCGGTTTCGCCTCTCGAATACAGATTGATAGCCTAT
CTCCTGCATCACAAGGGCCGCGTCGTGCCGCCTTCCGAGCTCATTGAGCACCTCTATGGCGACGACGACGCGCGCGATGC
AAACGCGCTTGAAGCGGTCGTGACGCGGCTGCGCAAGAAGCTCGGGCAGGACCTCATCGAGACGCGCCGGGGCTTCGGCT
ACGTTGTTTCGGACGCGCCCGCATGA

Protein sequence : 
MRILVVEDEPKILHSVVTALTAANYNTDAARDGETAWFRGDTEDYDLVILDLGLPKMDGLSVLKRWRAAGKMMPVLVLTA
RGAWSERVDGIDAGADDYLTKPFHVEELMARVRALIRRSVGYGSPVIEAGALTLDTRQMRVSLNGAQISVSPLEYRLIAY
LLHHKGRVVPPSELIEHLYGDDDARDANALEAVVTRLRKKLGQDLIETRRGFGYVVSDAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_31863 YP_007914546.1 DNA-binding response regulator in two-component regulatory system NC_002516.2.879194.p Protein 1e-44 45
HYPDE_31863 YP_007914546.1 DNA-binding response regulator in two-component regulatory system CP000647.1.gene1136. Protein 2e-38 41
HYPDE_31863 YP_007914546.1 DNA-binding response regulator in two-component regulatory system BAC0487 Protein 2e-33 41
HYPDE_31863 YP_007914546.1 DNA-binding response regulator in two-component regulatory system BAC0638 Protein 4e-25 41
HYPDE_31863 YP_007914546.1 DNA-binding response regulator in two-component regulatory system BAC0530 Protein 1e-38 41