|
Name : HYPDE_30148 (HYPDE_30148) Accession : YP_007914203.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : - COG ID : - EC number : - Position : 1518494 - 1520701 bp Length : 2208 bp Strand : - Note : COG1200 RecG-like helicase DNA sequence : GTGCTTATTGCCGCGACCCTCGTTTTATCGCCGTGCTCTCCACGTTATCGGACGGCGGGGCGCGAGATTCCTCAACGGCA AGCCAATTCGACAATGCGTCCCTCGTTTCTCAACCCGCTGTTCGCATCGGCGCAAACGATCGCCGGGATCGGCCCGCGGC TCATCCTGCTTTTGAAGAAGTGTCTGACACTGCCGCCAGGTGTCGCCGAGCCACGCGTGATCGACCTCTTATGGCATATG CCGACCGGCGTCATCGACCGGCGCGCTGAGCCCGAGCTTGCCTCCGCCGTTCCCGGCAGCATCGTGACGCTGAAGCTCAG AGTGCTGAAGCACAAGGCGCCGCCGCGCGGCAACAGGAAAGCCCCGTACAAAGTCACCTGCGAAGACGATACCGGCCGGA TCGATCTCGTGTTCTTCCACGCCGAGCGGAAGTTCATCGAAAAGCAGCTCCCCATCGGAGAATTGCGGTTCGTCTCGGGA CGTATCGAACGCTACGGCGAAGCGCTGCAGATGACACATCCGGATTATATCGTTGCGCCGGAGGCGCGTGACGATCTGCC GATGCTCGAACCTGTCTATCCGTTGACCGCCGGGTTGTCGGGCAAAATCATGGTCAAGGCGACGCGGCAGGCTGCGGATC GCGTTCCGGACCTGCCCGAGTGGCAGGAGCGCCGCTGGCTCGAAGCGCGCGGCTGGCTAGATTTCAAAGTGGCCGTCAGC CGGGTTCACCGCCCAGTCGATGCTCAGGATGTCTCGAACGGCGCAGGGCCCTGGCAGCGCCTTGCCTACGACGAGCTTTT AGCGGGCCAATTGGCGTTCGCCCTCGTTCGCCAGAATTTTAAAACCGAACGCGGCCGCCGCCTCTTGGGTGAAGGTCAAC TGCGAAGGAAAATCGCGGAGGCGCTTCCGTTCACGCTGACGCCGTCGCAGAAAATCGCCCTCGATGAAATCGCCGAAGAC CTTGCGGCACCCCATCGCATGCTGCGCCTGCTGCAAGGCGATGTCGGCTCCGGTAAAACCGTCGTTGCGCTGATGACGAT GGCCGTCGCGATCGAAGCCGGTGCGCAGGCCGCCTTGATGGCGCCGACTGAGGTCCTTGCACGCCAGCACCTCGAAACCA TCATGCCGCTTGCCGAAGCCGCGGGTTTGCAGGTCGCCTTGCTTATAGGCCGCGAAAAGGGCAAAGCGCGCGACGCAATC CTAGAACGCCTTGCATCCGGCGACATCGACATCTTGATCGGCACGCACGCGCTGTTTCAATCCGATGTCGTGTTCAAGGA TCTCGCTCTCGCCGTCATCGACGAGCAGCATCGTTTCGGCGTGCACCAGCGTCTGGCATTGCAAGCGAAAGGTGCCAACA ACGACACAAACGTCCTGGTGATGACGGCAACGCCGATTCCGCGAACGCTGCTGATGACGCATTACGGCGATCTCGACGTT TCCAAGCTTACGGAAAAGCCCGCCGGGCGGAAACCGATCACCACCAAAGCCGTGCCGCTTGAATTGCTAGAACGCCTGAT CGATCGCATTCGCGCGCAACTCGCCGAAGGTGCGCAAGTCTATTGGGTTTGCCCGCTGATCGAAAGCTCCGAGCTGACCG ATCTTGCCGCCGCAGAAGAACGGTTCGCACATCTCCGCCAGATTTTCGGAGAGAGTGTCGGTCTCCTGCACGGTGCTCTC TCTGCCAAGGACAAAGACGAGACGATGGCTGCCTTCGCCGACGGCCAGATCAAGATCCTTGTCGCGACGACCGTTATCGA GGTCGGCGTCAACGTCCCGAACGCCAACATCATGGTGATCGAGCACGCCGAGCGCTTCGGCCTCGCGCAATTGCATCAGC TGCGTGGACGGGTCGGCAGAGGCACGCGGGAATCCTTCTGCATGCTCCTTTACAAGGCGCCGCTCGGAGAGACGGCCGAG CAACGTCTCAAGATGATGGAAGAGACCGAAGACGGTTTCCAGATTGCCGAGAAAGATCTCGAACTGCGTGGCGGCGGCGA GATTCTGGGCGCCCGCCAGAGCGGAACCCCGAGCTTTCGCGTTGCCGAGGTGCCGGGTTACGAGACGTTACTCGCTGCCG CCCGCGATGACGCCGCGCTCGTGCTCGCCAACGATCCCCATCTCACGTCGCCGCGCGGGCAAGCGCTGCGCACGTTGCTT TACGTCTTCGAATGCGATGAGGCCGTGCGCCTGTTTCGTGCCGCCTAG Protein sequence : MLIAATLVLSPCSPRYRTAGREIPQRQANSTMRPSFLNPLFASAQTIAGIGPRLILLLKKCLTLPPGVAEPRVIDLLWHM PTGVIDRRAEPELASAVPGSIVTLKLRVLKHKAPPRGNRKAPYKVTCEDDTGRIDLVFFHAERKFIEKQLPIGELRFVSG RIERYGEALQMTHPDYIVAPEARDDLPMLEPVYPLTAGLSGKIMVKATRQAADRVPDLPEWQERRWLEARGWLDFKVAVS RVHRPVDAQDVSNGAGPWQRLAYDELLAGQLAFALVRQNFKTERGRRLLGEGQLRRKIAEALPFTLTPSQKIALDEIAED LAAPHRMLRLLQGDVGSGKTVVALMTMAVAIEAGAQAALMAPTEVLARQHLETIMPLAEAAGLQVALLIGREKGKARDAI LERLASGDIDILIGTHALFQSDVVFKDLALAVIDEQHRFGVHQRLALQAKGANNDTNVLVMTATPIPRTLLMTHYGDLDV SKLTEKPAGRKPITTKAVPLELLERLIDRIRAQLAEGAQVYWVCPLIESSELTDLAAAEERFAHLRQIFGESVGLLHGAL SAKDKDETMAAFADGQIKILVATTVIEVGVNVPNANIMVIEHAERFGLAQLHQLRGRVGRGTRESFCMLLYKAPLGETAE QRLKMMEETEDGFQIAEKDLELRGGGEILGARQSGTPSFRVAEVPGYETLLAAARDDAALVLANDPHLTSPRGQALRTLL YVFECDEAVRLFRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-157 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HYPDE_30148 | YP_007914203.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 9e-95 | 46 |
