|
Name : HYPDE_29993 (HYPDE_29993) Accession : YP_007914172.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 1479746 - 1481749 bp Length : 2004 bp Strand : + Note : COG0021 Transketolase DNA sequence : ATGAGCAAAGCCCAAAGCAAGGTGGTGACGTCGCCAGCCCCAAGCGTTCGCGACATGGCCAACGCCATTCGCGCGCTTGC CATGGATGCGGTGCAAGCGGCGAACTCAGGCCACCCAGGAATGCCAATGGGCATGGCCGACGTCGCGACTGTGCTGTTCA CAGAGGCACTGAAATTCGATCCTGCGGTTCCTTCGTGGGCTAACCGCGACCGCTTCGTTCTGTCGGCCGGGCACGGCTCG ATGCTGCTCTATGCGCTGCTGCATCTTACGGGCTACCCCGGCATGACGATCGATGAGCTGAAAAATTTCCGGCAGTTCGG CTCTAAGACGGCCGGACATCCTGAATATGGTCACGCGCCCGGCATCGAGACGACGACCGGTCCGCTCGGACAGGGGCTGG CGAACGCCGTCGGCATCGCGCTTTCGGAGCGGTTGCTCGCAGCACGTGTCGGCAACGATCTCATCGATTATCATACCTAC GTCATCGCCGGTGACGGATGCCTCATGGAAGGCATCAGTCAGGAAGCGATCTCGCTCGCGGGACACCTGAAGCTCGGTAA GCTGATCGTTCTCTGGGACGACAACTCGATTTCGATCGACGGCGCAACGAGCCTGTCCGTTTCCGACAACGAGATCGAAC GTTTCACGGCGTCCGGCTGGAATACCGCACGCGTCGACGGCTACGATCCGACGGCGATCGCGGCGGCCATCAAGGCTGCG AAGGCCAATACCTCACGGCCGTGGCTGATCGCGTGCAAGACCGTCATCGGGTACGGTGCGCCCAATAAGGCCGGAAAATC CTCCGCGCACGGAGAACCACTCGGCGCGGAAGAAATCAAGGCAACACGTGAACGGCTCGATTGGCCGTATCAGCCGTTTG ACGTCCCGGATCACATTTTATCGGCATGGCGCGCGGTCGGCAGCCGGGGCACGAAAGTTTACGCCGATTGGGCAAAGCGA CTTTCGACGGCAAACGCCGAAGCGAAGGCGCTGATCGGCGGCCGCAAGATCGAAACGGCAGTGGCTGCCGCGATCGCGGA GGCCAAGACGGCATTCGCGGCCGACACGGCGAAGCGGGCGACGCGCGTCTGGTCGCAATTGACGCTCGAGCGTCTGGTTC CGGCCCTGCCGGAGCTTATCGGCGGTTCGGCCGATCTAACAGGCTCGAACGGCACGAAGACGAAACATCATGCGTCGGTC ACGCCCGAGAATTTTGCAGGCAACTATGTGCACTACGGCGTGCGCGAGCACGGTATGGCGGCTGCCATGAATGGCATCGC GCTGTCGAACTCGTTCATTCCATACGGCGGCACGTTCCTGGTCTTCACCGATTATTGCCGCCCATCGATCCGCTTGTCGG CATTGATGCAGCAGCGTGTCATTTACGTGATGACGCACGATTCGATCGGGCTCGGGGAAGACGGGCCGACGCATCAGCCG GTCGAGCATCTGAGTGCGCTCCGCGCCATTCCGAATGTCTACGTGTTCCGGCCAGCCGACGGCATCGAAACGGCCGAGTG TTGGGAGCTTGCAATCGCTGCCAAAAGAACACCGTCGATCCTGGCGCTCTCGCGGCAGGCGGTTCCGAATCTCCGGAGCG ACGGTTCCGAGAACCGAAGTGCGAAGGGCGCCTATCTCATCAAATCCCCCGAGGGCAAGCGTGACGTAACATTGCTCGCA ACGGGATCTGAGGTCGGCGTTGCAGTCGAAGCGGCGGCGGAGTTGGCGAAGTCGGGAATCTCAGCTGCTGTGGTCTCGAT GCCATCGTTCGAACTTTTCCGCGCGCAGCCTGAAAGCTATCAGAATGACATTCTCGGCGAAGCGCCGCGCATCGCCATCG AAGCAGGCGTCGCCCAATCCTGGTACGAGTGGCTGAGAAAATCCGACAAGTTCGTCGGCATGTCGGGGTTTGGTGCGTCG GCTCCTGCTGGAAAACTCTTCGAGCATTTCGGCATCACGGCGGTACACGTCGCGGATATCGCCCGGCAGGCAGTCGCTTC GTAA Protein sequence : MSKAQSKVVTSPAPSVRDMANAIRALAMDAVQAANSGHPGMPMGMADVATVLFTEALKFDPAVPSWANRDRFVLSAGHGS MLLYALLHLTGYPGMTIDELKNFRQFGSKTAGHPEYGHAPGIETTTGPLGQGLANAVGIALSERLLAARVGNDLIDYHTY VIAGDGCLMEGISQEAISLAGHLKLGKLIVLWDDNSISIDGATSLSVSDNEIERFTASGWNTARVDGYDPTAIAAAIKAA KANTSRPWLIACKTVIGYGAPNKAGKSSAHGEPLGAEEIKATRERLDWPYQPFDVPDHILSAWRAVGSRGTKVYADWAKR LSTANAEAKALIGGRKIETAVAAAIAEAKTAFAADTAKRATRVWSQLTLERLVPALPELIGGSADLTGSNGTKTKHHASV TPENFAGNYVHYGVREHGMAAAMNGIALSNSFIPYGGTFLVFTDYCRPSIRLSALMQQRVIYVMTHDSIGLGEDGPTHQP VEHLSALRAIPNVYVFRPADGIETAECWELAIAAKRTPSILALSRQAVPNLRSDGSENRSAKGAYLIKSPEGKRDVTLLA TGSEVGVAVEAAAELAKSGISAAVVSMPSFELFRAQPESYQNDILGEAPRIAIEAGVAQSWYEWLRKSDKFVGMSGFGAS APAGKLFEHFGITAVHVADIARQAVAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 7e-136 | 49 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-130 | 47 |
