Gene Information

Name : HYPDE_29868 (HYPDE_29868)
Accession : YP_007914147.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.3
Position : 1453553 - 1454878 bp
Length : 1326 bp
Strand : +
Note : COG0460 Homoserine dehydrogenase

DNA sequence :
ATGGAACCCCTTACACTCGGTATAGCCGGAGTTGGCACGGTCGGTGGTGGCCTGCTGGAGCTTCTGACCACGAACGGCGC
GCATTTTGCGAACATCGTCGGGCGCGAAATCCGCGTGACCGGCGTTTCGGCGCGCAGCCGCGACAAGCTCAGGGGAGTCG
CGATCGGCGGTTTCCAGTGGTTCGACGATCCGGTGGCGCTGGCGAAGGACCCGTCAAACAACGTGTTCATCGAATTGATC
GGTGGCGAGGACGGCGTGGCCAAGGCGGCGGTCGAGGCCGCGCTTCAGGCAAAGAAACATGTCGTGACCGCCAATAAAGC
TCTGCTTGCAAAGCACGGGATCGAACTGGCGCGGCTTGCCGAGAAGAACGGCGTTGCGTTGAACTTCGAGGCAGCCGTCG
CAGGCGGCATTCCGATCATCAAGACGCTGCGCGAAGCGCTGGGCGCGAACCGCGTCCGGCGCGTCTACGGTATTTTGAAT
GGCACCTGCAACTTTATCCTGACGCAAATGCAGAGCGAGAACCGTCCATTCGCGGAGGTTCTGAAGGAAGCGCAGGCGCT
CGGATACGCGGAGGCCGATCCGACGTTCGACATCGGCGGCTTCGATTCAGCGCACAAGCTCGCACTGCTCACGAGTCTCG
CTTTTGGGACGAAGGTCGCCTTCGACCAGATCCACGTCGAGGGCATCCAGACGATCACGGAAGCCGACATCGAAGCCGCC
GACAGCCTCGGTTACCGCATCAAGCTGTTGGGCGTTGCGGCCGAAACGGAGACTGGCATCGAGGCACGGGTATCGCCGGC
TCTCGTCCTTAAAGATTCGGCCATTGCGGAAGTCTCAGGCGTCACCAATGCCATCGCCATCGAGGGCGATTTCTCGGGCA
GCATTCTGCTCGTCGGGGCGGGAGCGGGTGCCAAGCCGACGGCATCTGCAGTCGCCGGTGATATTCTCGATATCGCACGC
GGCTTGATCGTGCCGCCGTTCGTTACGCCTGTCGCAAAGCTCAAGCCGCATAAGCGTGCCAAGCTCGACCGGCATTACGG
GTCCTACTACGTCCGGCTGGCACTCTACGATAAGCCGGGCGCCATGGCCGCGGTCGCCAAGAGCATGGGCGACCAGGGCA
TCTCGCTCGAGAGCATCGTGCAGCATCGGCCGCAGACTCTGCATGCGCCGCGCACCGCTCCGCAGCGGTCCAAGGACAAG
GCACAGCCGGTGATCATCATTACGCATGAGACGACCGAAGAAGCGATGCGCAAGGCGCTGGCGGCGATCGAGAAGGACGG
CAACGTCACCGAGACCCCGCAGATGATCCGCATCGAAGAACTGTAG

Protein sequence :
MEPLTLGIAGVGTVGGGLLELLTTNGAHFANIVGREIRVTGVSARSRDKLRGVAIGGFQWFDDPVALAKDPSNNVFIELI
GGEDGVAKAAVEAALQAKKHVVTANKALLAKHGIELARLAEKNGVALNFEAAVAGGIPIIKTLREALGANRVRRVYGILN
GTCNFILTQMQSENRPFAEVLKEAQALGYAEADPTFDIGGFDSAHKLALLTSLAFGTKVAFDQIHVEGIQTITEADIEAA
DSLGYRIKLLGVAAETETGIEARVSPALVLKDSAIAEVSGVTNAIAIEGDFSGSILLVGAGAGAKPTASAVAGDILDIAR
GLIVPPFVTPVAKLKPHKRAKLDRHYGSYYVRLALYDKPGAMAAVAKSMGDQGISLESIVQHRPQTLHAPRTAPQRSKDK
AQPVIIITHETTEEAMRKALAAIEKDGNVTETPQMIRIEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 4e-59 42
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 4e-59 42