|
Name : HYPDE_29353 (HYPDE_29353) Accession : YP_007914045.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1337570 - 1338859 bp Length : 1290 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : GTGTTCGATATCAAATGGATCAGAGACAATGCTGCAACCTTCGATGAAGGCTTGAAGCGCCGGGGCCTCCCGCCGCAGGC CGCCGCTCTGGTCGCGCTCGATGACAGGCGCCGGCAGACGCTGACGACACTGCAGGATGCGCAATCGCGCCGAAACGCGG CATCGAAGGAGATCGGCAAAGCCAAGGGTGCGAAGGACGAAGCGACGGCCGCGCGATTGATGGCCGAGGTCGCGGACTTG AAGGACATCATCGCCAAAGGCGAGGACGACGAGCGCAAGCTCGATGCCGAGATCAAGGCGGCGCTTGAAATCATTCCCAA CTTGCCGCGCGCCGACGTTCCGGATGGTGCCGACGAAACGGGCAACGTCGAGGTGCGCCGCGTTGGGACGCCAGCAAGTT TCGATTTTGCACCGAAGCAGCATTTCGAGATCGGTGAAGCGCTGGGATTGATGGACTTCGAAGCGGCGCAGAAAATTTCC GGCGCACGGTTCGTCGTGTTGAAGGGAGCCCTGGCGCGTCTGGAGCGAGCGCTCGCGAGCTTCATGCTCGATCTGCATAC GAGCGAGTTTGGCTACACGGAAGTCAATCCGCCGATCCTGGTCAAGGATCAGGCGGCCTATGGCACGGCCCAGTTGCCGA AGTTTGCGGAAGACCTGTTCAAGACGACGAACGATTTCTGGCTTCTTCCGACCGCCGAGATTTCGCTGACGAACCTTGTG CGCGAAGAGATTATCGACGAAGCGCAACTGCCGATGCGGGTAACGGCATGGACGCCGTGCTTCCGTTCGGAGGCGGGCGC TGCCGGCAAGGATACGCGCGGCATGATCCGCCAGCACCAATTCTCGAAGGTCGAACTCGTGTCGATCACGACACCGGACA AATCGCTTGAAGAGCACGAACGCATGACGTCATGCGCCGAGGAAGTGCTGAAACGCCTCGGCCTGCCGTTCCGCACCATC GTTCTTTGCACCGGCGACATGGGATTTGCTTCGCAGAAAACCTACGACATCGAGGTCTGGCTTCCGGGGCAAAATACCTA TCGCGAGATTTCATCCTGCTCGGTGTGCGGCGACTTCCAGGCGCGGCGCATGGATGCGCGCTACCGTCCGAAGGACGGCG GCAAGCCGGTCTACGTCCATACGCTCAACGGCTCGGGTCTTGCCGTCGGCCGCACGCTGATCGCCGTGCTTGAAAACTAT CAACAGGCCGACGGCAGTGTCATAATTCCCGATGCCCTCCAGCCTTACATGGGCGGCCTGAAGAGGATAGCGGCGGCCAA GACCACATGA Protein sequence : MFDIKWIRDNAATFDEGLKRRGLPPQAAALVALDDRRRQTLTTLQDAQSRRNAASKEIGKAKGAKDEATAARLMAEVADL KDIIAKGEDDERKLDAEIKAALEIIPNLPRADVPDGADETGNVEVRRVGTPASFDFAPKQHFEIGEALGLMDFEAAQKIS GARFVVLKGALARLERALASFMLDLHTSEFGYTEVNPPILVKDQAAYGTAQLPKFAEDLFKTTNDFWLLPTAEISLTNLV REEIIDEAQLPMRVTAWTPCFRSEAGAAGKDTRGMIRQHQFSKVELVSITTPDKSLEEHERMTSCAEEVLKRLGLPFRTI VLCTGDMGFASQKTYDIEVWLPGQNTYREISSCSVCGDFQARRMDARYRPKDGGKPVYVHTLNGSGLAVGRTLIAVLENY QQADGSVIIPDALQPYMGGLKRIAAAKTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-92 | 51 |
