Gene Information

Name : HYPDE_28253 (HYPDE_28253)
Accession : YP_007913829.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 1115312 - 1117021 bp
Length : 1710 bp
Strand : -
Note : COG2060 K+-transporting ATPase, A chain

DNA sequence :
ATGACATTGGCCGGTTGGTTTGAGATTGCCCTGGTGCTCGGCGCTGTTCTCGCAGCGGCTTGGCCGCTCGGTCTCTATAT
GGCGCGAGTGTTTGCGGGAGAGCGCACCGCGCTTTCAACTGTTATGCGGCCCGTGGAACGAGGACTTTATGCCTTTGCGC
ATGTCCAGCACGGCTCCGAACAGAACTGGCTCTCGTACACGTTGTCCATGCTCATCTTCAATGGCGCGGGATTCCTTTTC
CTTTATGCGCTGATGCGGCTCCAACATGCGCTCCCACTCGATCCGCAGGATTTCGCCGCCGTCGAGCCAAGCCTCGCATT
CAATACGGCGATGAGCTTCGTCACCAACACCAACTGGCAATCCTATGCCGGCGAGACGACGATGGGCCACCTCGTACAGA
TGGCCGGACTTACCGTTCAGAATTTCCTTTCCGCCGCGACCGGCATCGCACTTGCGATTGCCGTGACGCGCGCCTTCGCA
CGCAGCGGCGCACGTGAAATCGGCAATTTCTGGGTCGATGTCACACGCGCAACGCTCTACGTCCTGCTGCCGCTGGCGAT
CTTCGTCGCGATCCTCTATACCGCCTCCGGCGTCCCACAAACGCTTGCAGCCAACGTTTCGGCGACCACGCTCGAAGGTG
CGAAGCAGACGATTGCACTCGGCCCCGTCGCAAGCCAGGAGGCGATCAAACAGCTCGGAACCAACGGTGGCGGATTCTTT
AACGCCAACGCCGCGCATCCCTTCGAGAACCCGAGCGTCTGGTCCAACATCCTGTCGATCTGGAGCATGCTGCTCATTCC
AACGGCGATGACATTCACGTTCGGACGCATGGTCGGCGACCGGCGCCAAGGCTACGCGTTGCTCGCCGTCATGGGCGTGC
TGCTCATCGTAGGGACGGCTGTGGTCTACGCGTCCGAGACTGCGGGCAATCCGCTGCTCACAACAGCCGGGGTCGATCCT
TCATCCGGCAATCTCGAAGGCAAAGAAATTCGCTTCGGGCAAGCTCTGACCGCGCTCTATGTCGCCGCTACGACGGGAAT
TTCGTGCGGCGCTGTCAACGCCATGCACGACTCGCTGACACCGCTCGGCGGCATCGTTCCTCTATTCATGATCGAGCTCG
GCGAGATCCTGCCCGGCGGCGTCGGCTCCGGTCTCTATGGCATGATCGTGATGGCGCTGCTGGCCGTGTTCGTTGCCGGT
CTGATGGTTGGGCGAACGCCGGAATACCTCGGCAAGAAGGTCGAGGCACGCGAGATGAAGCTTGCGATGCTGGCGTTGCT
CGTTCTTCCTTTCTGTATTCTCGGTTTTACCGCCATTGCCGCCGTGCTCCCGACGGCGCTAGCCAGCCTTGCCAACAGCG
GGCCGCATGGGCTGACCGAGATCCTCTACGCCTACTCCTCGGCAACCGGAAACAATGGCTCGGCCTTCGCCGGTCTCAAC
GCCAATACACCCTGGTTCAACACGACGCTCGGCCTCGCGATGATGTTCGGACGCTTTGCCTATGTCGTCCCGGTGATGGC
GATTGCAGGCTCGATCGCGACCAAAACGAAGACGGCGGCCTCGGCCGGTACATTTCCGACGGACGGCATGTTGTTCTGCG
GCTTGCTCACCGGCGTGATCCTGATCCTCGGCGGTCTGCTCTATTTCCCGGCTCTCGCGCTCGGTCCCATCGTCGAGCAC
TTCCTGATGCTGGCCGGCAAGACGTTTTGA

Protein sequence :
MTLAGWFEIALVLGAVLAAAWPLGLYMARVFAGERTALSTVMRPVERGLYAFAHVQHGSEQNWLSYTLSMLIFNGAGFLF
LYALMRLQHALPLDPQDFAAVEPSLAFNTAMSFVTNTNWQSYAGETTMGHLVQMAGLTVQNFLSAATGIALAIAVTRAFA
RSGAREIGNFWVDVTRATLYVLLPLAIFVAILYTASGVPQTLAANVSATTLEGAKQTIALGPVASQEAIKQLGTNGGGFF
NANAAHPFENPSVWSNILSIWSMLLIPTAMTFTFGRMVGDRRQGYALLAVMGVLLIVGTAVVYASETAGNPLLTTAGVDP
SSGNLEGKEIRFGQALTALYVAATTGISCGAVNAMHDSLTPLGGIVPLFMIELGEILPGGVGSGLYGMIVMALLAVFVAG
LMVGRTPEYLGKKVEAREMKLAMLALLVLPFCILGFTAIAAVLPTALASLANSGPHGLTEILYAYSSATGNNGSAFAGLN
ANTPWFNTTLGLAMMFGRFAYVVPVMAIAGSIATKTKTAASAGTFPTDGMLFCGLLTGVILILGGLLYFPALALGPIVEH
FLMLAGKTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-73 46
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 3e-73 46
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 4e-69 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-69 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-69 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-69 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-69 41
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-69 41