|
Name : HYPDE_28248 (HYPDE_28248) Accession : YP_007913828.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 1113250 - 1115301 bp Length : 2052 bp Strand : - Note : COG2216 High-affinity K+ transport system, ATPase chain B DNA sequence : ATGAGCAAGCGCGTAATTCACGGATTGCTGGACCAATCCATTCTCCGCCGTGCCACCGTCGATGCTGTTCGCAAGCTCGC GCCCAGAAAACTCGTTCGCAACCCGGTCATGTTCGTGACGGGCGCGGTGGCGGCCTTGGTCACGCTGATCTTCATCCGCG ATATCGCGGTGGGCCGGGCTGGCCTTCTCTTCACTGGACAGATCGCGGCTTGGCTGTGGTTTACCGTTCTTTTCGCCAAC TTCGCCGAAGCGGTGGCAGAGGGACGTGGCCGTGCCCAGGCGGACGCGCTCCGGCGCACGCGCAGCGACACGATCGCAAA ACTGCTGCTTCATCCCGACGACACGAAAGACGACCCGTGGGAGTCGAAGCCCGCGCAAGATCTCGTCGCTGGTGACGTCG TTCTGGTAGAGGCTGGAGATACGATTCCCGCCGATGGCGAGGTCATCCAGGGCATTGCTTCGGTCAACGAGTCCGCCATC ACCGGCGAATCCGCGCCTGTTATCCGAGAGTCGGGCGGCGACCGCTCTGCGGTGACGGGAGGCACGGTCGTGTTGTCCGA TTGGATTATCGTGCGTATCACGGCAGTCGCGGGTTCCTCGTTCCTCGACCGCATGATCGCCCTTGTGGAAGGCGCCGAAC GACAGAAGACGCCGAACGAGTTGGCGTTGTCGATCCTGCTGTCCGGCATGACCCTGATTCTGCTGATTACGGTTACGACG CTATGGGGCATCGCCGATTATTCTTCGACCGAAGTCTCTGTGACGGTGCTCGTCGCCCTGCTCGTCACGCTCATCCCGAC GACCATCGGTGGTCTCCTGTCGGCAATCGGCATCGCGGGGATGGATCGACTTGTTCGCTTCAACGTGGTCGCCACCTCCG GTCGCGCGGTCGAGGCAGCAGGCGATGTCGACACGCTGCTTCTCGACAAGACCGGCACCATCACCTACGGCAACCGTCTC GCGAGCGCCTTCATACCTGTACCCGGCCGCTCGGAGCACGACGTTGCGAAATCGTCACTTCTTGCGTCGCTCGCAGACGA AACGCCGGAAGGACGTTCGATTGTGGCGCTTGCGCGCGGCCACTACGGACTTCCGGACATCGGCGACATGGTCCCGACGA AGGTCATTCCGTTTTCCGCCCAGACCCGCGTCTCCGGCATCGATATCGATGGCCGCAACATACGCAAGGGCGCAGTCGAT GCGATGCTGGCGCAGGTCGGCCAGACGATCGAACATGCTCCGGCGGTATTTCGGCAAGCCGTGGACTCGATCGCACGGAC GGGTGGCACGCCGCTCGCCGTCGCTGAAGGCTCCGATCTTGTCGGCGTCATTCACCTCAAGGACGTCGTCAAACCCGAGA TCAAGACACGCTTTGCGGCGCTGCGCCAGATGGGCATCAAGACCGTGATGGTCACGGGCGACAACCCCGTCACCGCCGCA GCCATCGCCTCCGAAGCTGGCGTCGATGACTACATCGCGGAAGCCACTCCGCAGGACAAGCTCGCCTATATCCGCTCCGA GCAGCGTAAGGGCCGCCTGATCGCCATGTGCGGCGACGGCACGAACGACGCACCCGCACTCGCGCAGGCCGACGTCGGGG TTGCCATGCAGACCGGTACCCAGGCAGCGCGAGAAGCGGGCAACATGGTGGACCTCGACAGCGATCCGACCAAGCTGATC GAGATCACCGAAATCGGCAAGCAACTGCTGATGACGCGCGGCTCGCTGACGACGTTCTCGATAGCGAACGACGTGGCGAA GTACTTCGCGATTATCCCAGCGCTGTTCGTCGCCACCTACCCCGAACTTGGCAAGCTGAACGTCATGGCTCTCACGACGC CACAGAGCGCCATCCTGTCCGCCGTCATCTTCAACGCGCTCATTATCGTCGCCCTGATACCGCTGGCGCTGAAAGGCGTC GCTTACCGGCCGATCGGAGCAGCCGCACTCCTGAGGCGCAACCTGCTTGTCTACGGCCTCGGTGGCATCATCGTCCCATT CATCGGAATCAAGATCGTGGACTTGACTGTCTCAGCCCTGGGTCTCGCTTAA Protein sequence : MSKRVIHGLLDQSILRRATVDAVRKLAPRKLVRNPVMFVTGAVAALVTLIFIRDIAVGRAGLLFTGQIAAWLWFTVLFAN FAEAVAEGRGRAQADALRRTRSDTIAKLLLHPDDTKDDPWESKPAQDLVAGDVVLVEAGDTIPADGEVIQGIASVNESAI TGESAPVIRESGGDRSAVTGGTVVLSDWIIVRITAVAGSSFLDRMIALVEGAERQKTPNELALSILLSGMTLILLITVTT LWGIADYSSTEVSVTVLVALLVTLIPTTIGGLLSAIGIAGMDRLVRFNVVATSGRAVEAAGDVDTLLLDKTGTITYGNRL ASAFIPVPGRSEHDVAKSSLLASLADETPEGRSIVALARGHYGLPDIGDMVPTKVIPFSAQTRVSGIDIDGRNIRKGAVD AMLAQVGQTIEHAPAVFRQAVDSIARTGGTPLAVAEGSDLVGVIHLKDVVKPEIKTRFAALRQMGIKTVMVTGDNPVTAA AIASEAGVDDYIAEATPQDKLAYIRSEQRKGRLIAMCGDGTNDAPALAQADVGVAMQTGTQAAREAGNMVDLDSDPTKLI EITEIGKQLLMTRGSLTTFSIANDVAKYFAIIPALFVATYPELGKLNVMALTTPQSAILSAVIFNALIIVALIPLALKGV AYRPIGAAALLRRNLLVYGLGGIIVPFIGIKIVDLTVSALGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-147 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-147 | 58 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-137 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-137 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-137 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-138 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-137 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-137 | 54 |
