Gene Information

Name : B1NLA3E_04360 (B1NLA3E_04360)
Accession : YP_007909147.1
Strain : Bacillus sp. 1NLA3E
Genome accession: NC_021171
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 970906 - 972738 bp
Length : 1833 bp
Strand : +
Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases

DNA sequence :
ATGACATATAAAAAAAGATTATCACTGTTTATGATTATAGATTCATGTATTGTCATAACTGCAATTTTTGTTGGGAGATT
TTTGGTAAATGCAACATTGAATGTGATTACTATTCCAATAATCGCTAGTTCAATAGCCATTTTACTGAGTCATCATCTTT
TTTCATTAGTATATAAACTTTATAAAAAGGCCTGGGAGTATGCCAGTGTAGGGGAATTATTGATTATTTTTAAAGTAGTA
ACTTTTTCTATTATGGTAGCAGCTATTGTTCAACAAGTGATGGTAGGAGAAATATACTTTCGTTTATTAACAGTTACTTG
GTCTCTACATATTCTCTTAATTGGTGGATCCAGATTTTGTTGGCGAATCATGAGAGATACAATTATTGATACACATCAAA
ATAAAAAACGTACTTTGATTATTGGTGCTGGTTCTGCTGGAACCATGGTTGCACGGCAGTTAATAAAAAATTCTGAAGCA
AATCTAATACCTGTAGCATTTATTGATGATAATGAAAAGAAACACCAACTAGAAATACTTGGGATAACAGTTGTTGGTGG
TGTAAATGAGATTGAGAAAACAGTTAAAAAGCTAGAAATCGATAATATTATTATTGCCATTCCTTCTCTAAATCGAAAAG
AGTTAAATTCTATTTTTCAAGAATGTGCAAAGACAAAGGCAAAAACGAAAATTCTACCAATGCTTGAAGATTTGGTAACT
GGGAAAATATCAGTTAATCAATTTCGAGATGTCCAAGTAGAGGACCTTTTAGGAAGAGACCCGGTAGATCTAAATATTGA
GAGTATTTCGGAATATATCACCGATAAGGTTGTATTAGTTACAGGGGCAGGAGGATCAATTGGGTCAGAGATTTGTAGGC
AAATATCAAATTTCACTCCAAGAAAATTAGTGTTACTAGGACATGGAGAAAATAGTATTTACTCTATTGAGATGGAACTA
AAAGAAACTTTCGGTATTACAAAAATTGAATTTATTACTGAAATTGCCGATCTTCAAGATGCAAAAAAAATGATGGATGT
GATGGGTACATATCAGCCCCATGTTGTTTACCATGCAGCTGCTCACAAGCATGTACCGTTAATGGAACGAAATCCAGAAG
AAGCCGTCAAGAATAATGTTATCGGAACGATGAACATTGCTAATGCGGCAAGTTGGCACGGAGTGGAAACATTTGTGATG
ATTTCTACAGATAAAGCAGTAAACCCAACAAGTGTAATGGGCTCTACGAAAAAGTTAGCTGAAATGATTATTCAACACAT
GGACAAGAATAGTAAAACAAAATTTGTTGCAGTACGGTTTGGAAACGTTCTAGGAAGCCGGGGAAGTGTTATTCCACTAT
TTAAAAAACAAATCGAAAAGGGTGGACCAATAACGGTTACAGACCCAGAAATGGTTCGCTACTTTATGACAATTCCGGAA
GCGTCGCGACTTGTTATTCAAGCAGGATCCTTGGCAAGAGGTGGGGAAGTTTTCATCTTGGATATGGGTGAGCCCGTAAA
AATAGTTGATTTGGCCAAAAACTTAATCAAGCTATCGGGGAATAATATTGAAGAAATCGGAATAGAATTTACAGGAATTC
GCCCTGGTGAAAAGTTGTTTGAAGAGCTTCTAAAGGATGATGAAGTTCATGATAAACAAGTTTACCCAAAAATCTATATA
GGAAAGACAGCAGAGCTGTTCTTCAATGAAATTGAAGAATTGATCGCCAATTATTCAAACATGGATAAAGAAGCATTGAG
GGAGAAACTGTTGAATTTAGCAAATAACAGAGTTGCTACTCAGTCGCAACCAATCATGACAATTCCTAGTTAA

Protein sequence :
MTYKKRLSLFMIIDSCIVITAIFVGRFLVNATLNVITIPIIASSIAILLSHHLFSLVYKLYKKAWEYASVGELLIIFKVV
TFSIMVAAIVQQVMVGEIYFRLLTVTWSLHILLIGGSRFCWRIMRDTIIDTHQNKKRTLIIGAGSAGTMVARQLIKNSEA
NLIPVAFIDDNEKKHQLEILGITVVGGVNEIEKTVKKLEIDNIIIAIPSLNRKELNSIFQECAKTKAKTKILPMLEDLVT
GKISVNQFRDVQVEDLLGRDPVDLNIESISEYITDKVVLVTGAGGSIGSEICRQISNFTPRKLVLLGHGENSIYSIEMEL
KETFGITKIEFITEIADLQDAKKMMDVMGTYQPHVVYHAAAHKHVPLMERNPEEAVKNNVIGTMNIANAASWHGVETFVM
ISTDKAVNPTSVMGSTKKLAEMIIQHMDKNSKTKFVAVRFGNVLGSRGSVIPLFKKQIEKGGPITVTDPEMVRYFMTIPE
ASRLVIQAGSLARGGEVFILDMGEPVKIVDLAKNLIKLSGNNIEEIGIEFTGIRPGEKLFEELLKDDEVHDKQVYPKIYI
GKTAELFFNEIEELIANYSNMDKEALREKLLNLANNRVATQSQPIMTIPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-127 57
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-126 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B1NLA3E_04360 YP_007909147.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 5e-125 53
B1NLA3E_04360 YP_007909147.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 4e-78 42