Gene Information

Name : B1NLA3E_20205 (B1NLA3E_20205)
Accession : YP_007912282.1
Strain : Bacillus sp. 1NLA3E
Genome accession: NC_021171
Putative virulence/resistance : Virulence
Product : RNA-directed DNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4374012 - 4375256 bp
Length : 1245 bp
Strand : -
Note : COG3344 Retron-type reverse transcriptase

DNA sequence :
ATGGATAAAACAAAGCCATATGAAATATCTAAAAAGATAGTGTATGAAGCCTTTATAAGAGTTAAAGCAAATAAGGGTTC
AGCAGGAATTGATGAACAATCCATAGAAGAATTTGAAAGAAATCTAAAAGATAATCTATATAAAGTTTGGAACAGAATGT
CATCGGGAAGTTACTTCCCTCCAGCAGTTAAGGCTGTAGAAATACAAAAGAAAGCTGGGGGTACTAGGACACTTGGAATT
CCAACGGTTGCGGATAGAATTGCACAGATGACAGTGAAATTATATTTCGAACCTTCGGTAGAACCATTCTTTTATGAGGA
TTCCTATGGATATAGACCTAAGAAAAGCGCCATTCAAGCAATAGAGACAACTCGAAAAAGATGCTGGAAGTACAATTGGA
TACTTGAATTTGATATAAAAGGTTTATTCGATAACATCGATCATGAGTTCCTGATGAGAGCTGTAGATAAGCATACAGAC
GTAGAATGGGTTAAGCTGTACATCAAAAGATGGTTAACCGCACCATTTCAAACAAAAGAAGGAATAAAAGAACGTACCTC
CGGCACACCGCAAGGTGGTGTCATAAGTCCGGTGCTAGCAAATTTGTTTCTACATTATGCGTTTGATAAATGGATGGCTA
TTAATCACCCCAGCAAACCATTCGCTAGATATGCAGATGACGCAGTCATCCACTGTAAGACAGAGGAAGAAGCAAAGAAA
GTGCTCAAATCCTTAAGCAAGAGAATGAACGAATGTAAACTCGAACTACATCCTTCCAAAACAAAAATTGTATATTGTAA
GGATGCGGACAGGAAAGAAGATCATGAAAACATAGCGTTTGATTTTCTGGGATACACGTTCAGACCAAGGCTGTCAAAGA
ACAGGTGGGGAAAACACTTTGTGAATTTCACGCCAGCCATCAGTAACAAATCTAAGAAATCAATACAGCAAAAAGTGAGA
GATTGGAAACTACAATTGAAGGCGGATAAAGAGCTCATAGACCTATCAAATATGTTTAACTCAGTAATTCAAGGGTGGAT
TAACTACTATGGGAAATTCTACAAATCTGAAATGTACTCCTCTTTAAGGCACATAAACAAAGCCTTAATTATGTGGGCGA
GAAGGAAATATAAAAAGCTATCTCGACACAAGAAAAGGGCAGAACATTTTCTAGGCAGAATTTCTAAACAAAATCCTAAA
CTCTTCAAACACTGGGATATAGGCATCAAACCTACGGCTGAATAA

Protein sequence :
MDKTKPYEISKKIVYEAFIRVKANKGSAGIDEQSIEEFERNLKDNLYKVWNRMSSGSYFPPAVKAVEIQKKAGGTRTLGI
PTVADRIAQMTVKLYFEPSVEPFFYEDSYGYRPKKSAIQAIETTRKRCWKYNWILEFDIKGLFDNIDHEFLMRAVDKHTD
VEWVKLYIKRWLTAPFQTKEGIKERTSGTPQGGVISPVLANLFLHYAFDKWMAINHPSKPFARYADDAVIHCKTEEEAKK
VLKSLSKRMNECKLELHPSKTKIVYCKDADRKEDHENIAFDFLGYTFRPRLSKNRWGKHFVNFTPAISNKSKKSIQQKVR
DWKLQLKADKELIDLSNMFNSVIQGWINYYGKFYKSEMYSSLRHINKALIMWARRKYKKLSRHKKRAEHFLGRISKQNPK
LFKHWDIGIKPTAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 8e-119 52
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 1e-81 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B1NLA3E_20205 YP_007912282.1 RNA-directed DNA polymerase VFG1512 Protein 8e-82 42