Gene Information

Name : Asulf_01981 (Asulf_01981)
Accession : YP_007907940.1
Strain : Archaeoglobus sulfaticallidus PM70-1
Genome accession: NC_021169
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1790950 - 1792470 bp
Length : 1521 bp
Strand : -
Note : PF00152:TIGR00499:COG1190; PFAM: tRNAsynthetasesclassII(D,KandN); COG: Lysyl-tRNA synthetase (class II); TIGR: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGACCCTCCCAAAGCTCGTAAAGGATTACATTGACAAGCTGAAAGGACTCAGAGAATTAGGTAAAGATCCATTTAAGAT
AAAGAAGTTTGATAGAACCGCAAATGCTGATGAGATCGTTAAAAAATTCTCAAATCTGAATCCGGGAGATGAAACAGACT
TCAATGTTAGAATTGCTGGTAGATTGATGTCAAAAAGAAAGCATGGTGGAGTTATTTTTGCTGATTTAAAAGATTCATCT
GGAAGAATCCAGCTTGTGTTCAGGAAAGATTTCACAAATGAGTTTAAAGAACTCAAATTGGTTGAGAGGGGAGATATTCT
CGGTGTTGATGGATTCGTTATCAAAACCAGAAGAGGAGAGGTTAGCGTTCTCGTTAAAGAATGGACCGTACTGTCAAAGA
TTCTAAGACCCCTGCCGGATAAGTGGCACGGGCTTGAAGATATAGAGACCAGATACAGGCAGAGATATCTCGACTTCATC
ATGAACGAAGAGAGCAGAGAGACCTTCTTCCTGATCAACAAAGTGATACACCTCATCAGAAATTACTTGAACGATAACGG
GTTCATAGAAGTATATACTCCAATACTTCAGCCTGTATATGGTGGAGCTTTTGCGAGGCCTTTCGAGACATACCATCACT
TCCTCGAGGAGAAGATGTACCTCAGAATAGCTCCAGAATTGTACCTCAAGAGGTTGCTCGTTGGTGGTTTTGAGAAGGTG
TATGAGTTCGCTCCGTGCTTCAGGAATGAGGATGTCGACCCTCTGCACAATCCAGAGTTCATTCAGCTTGAGTTTTACTG
GGCTTACATCGAACTCAGTCAGCTCATGGACTTTCTCGAGAAAATGTTCGAGGAGGTTGTTTTGAAAGCTACTGGAAAGA
CTGAAATCGAGTACCAGGGCAAGATTGTGAACTTTAAGAGACCATGGAAGAAGATGAGAATGGTCGATGCAATAAAGGAG
TTCGGAGGAATAGATGTAGAGAAGATGAGCGATGATGAGCTGTTTAACCATGCAAAAGAACTTGGAATAGAGGAAGAAAG
GAGAGGCGAGATAATAGAGAAGCTGTTCGACTACTATGCCAAGGACAAGATCGTCAACCCAACCTTCATCACACACTTCC
CGGTGGATATCTCCCCGTTGGCAAAGAAAGCAGATGGCTATGCAGACAGAATGGAGCTGTACATAGCAGGAATGGAGGTT
GCTAACGGTTTTTCCGAGCTGAATAACCCGATTGAGCAGTACATGAGGTTTAAAGAAGAGGAAGAGTTGCGAAAGAGGAG
CGATAAGAAGGGTCTGGAGACGATGCCGATGGACAAGGACTACATCAGGGCTCTGGAATATGCGATGCCTCCTGCAAGCG
GTGTTGGAATTGGTCTGGGAAGGCTTTTCATGATACTGGGAAACAAAAGAACGCTGAGAGAGGTGATTGCATTCCCAACA
CTTGCTAAAGAACCTGATTTCGAGGTTATACCTGAGATCTATCCAGAGGTTCTTGAGTGGTATGGTCGAACAGAGCGATA
A

Protein sequence :
MTLPKLVKDYIDKLKGLRELGKDPFKIKKFDRTANADEIVKKFSNLNPGDETDFNVRIAGRLMSKRKHGGVIFADLKDSS
GRIQLVFRKDFTNEFKELKLVERGDILGVDGFVIKTRRGEVSVLVKEWTVLSKILRPLPDKWHGLEDIETRYRQRYLDFI
MNEESRETFFLINKVIHLIRNYLNDNGFIEVYTPILQPVYGGAFARPFETYHHFLEEKMYLRIAPELYLKRLLVGGFEKV
YEFAPCFRNEDVDPLHNPEFIQLEFYWAYIELSQLMDFLEKMFEEVVLKATGKTEIEYQGKIVNFKRPWKKMRMVDAIKE
FGGIDVEKMSDDELFNHAKELGIEEERRGEIIEKLFDYYAKDKIVNPTFITHFPVDISPLAKKADGYADRMELYIAGMEV
ANGFSELNNPIEQYMRFKEEEELRKRSDKKGLETMPMDKDYIRALEYAMPPASGVGIGLGRLFMILGNKRTLREVIAFPT
LAKEPDFEVIPEIYPEVLEWYGRTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-82 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asulf_01981 YP_007907940.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 8e-83 42