Gene Information

Name : STU288_04615 (STU288_04615)
Accession : YP_007902024.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Resistance
Product : multidrug transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 961891 - 962229 bp
Length : 339 bp
Strand : -
Note : COG2076 Membrane transporters of cations and cationic drugs

DNA sequence :
ATGACTAAAGAAGCTGTAATCTTTCTATTTATCGCCATCGTGGTAGAAGTTATCGCCACGATCTCATTAAAATTATCAGA
TGGTTTTACGCGTCTGGTACCGAGCCTCGTTACTATCATCGGATATTGTATTGCGTTCTGGTGTCTTACCATCCCAATGC
GAACCATCCCTGCGGGTATCATTTATGCCATTTGGTCTGGGGTAGGGATTGTTCTTATTGGATTGATAGGATGGTTGTTT
CTTGGCCAAAAACTGGATGTGCCGGCTATTATTGGCATGTTGCTTATCATCTGCGGCGTAATCGTAATCAATCTGTTTTC
AAAAAGTGTCAGTCACTAG

Protein sequence :
MTKEAVIFLFIAIVVEVIATISLKLSDGFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLF
LGQKLDVPAIIGMLLIICGVIVINLFSKSVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 3e-10 57
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 3e-10 57
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-10 57
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 3e-10 57
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-10 57
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-10 57
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-10 57
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 4e-10 57
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-10 57
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 4e-10 57
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 3e-10 57
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-10 57
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 3e-10 57
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 3e-10 57
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-10 57
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 3e-10 57
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-10 57
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 3e-10 57
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 3e-10 57
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 4e-10 57
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-06 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_04615 YP_007902024.1 multidrug transporter CP001138.1.gene1489. Protein 2e-34 99
STU288_04615 YP_007902024.1 multidrug transporter BAC0150 Protein 9e-15 59
STU288_04615 YP_007902024.1 multidrug transporter NC_002695.1.913273.p Protein 9e-15 59
STU288_04615 YP_007902024.1 multidrug transporter BAC0322 Protein 4e-15 57
STU288_04615 YP_007902024.1 multidrug transporter BAC0324 Protein 1e-13 57
STU288_04615 YP_007902024.1 multidrug transporter BAC0377 Protein 2e-17 57
STU288_04615 YP_007902024.1 multidrug transporter BAC0323 Protein 1e-10 57
STU288_04615 YP_007902024.1 multidrug transporter CP004022.1.gene1549. Protein 1e-18 55
STU288_04615 YP_007902024.1 multidrug transporter NC_010410.6003348.p0 Protein 4e-11 53
STU288_04615 YP_007902024.1 multidrug transporter BAC0002 Protein 4e-11 53
STU288_04615 YP_007902024.1 multidrug transporter BAC0139 Protein 1e-07 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_04615 YP_007902024.1 multidrug transporter VFG1587 Protein 2e-06 41