Gene Information

Name : STU288_03335 (STU288_03335)
Accession : YP_007901772.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone protein SscB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 702798 - 703232 bp
Length : 435 bp
Strand : +
Note : COG0457 FOG: TPR repeat

DNA sequence : 
ATGATGATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACATTCTGAAACAGCTATTATCCGTTGATCCGGAAACCGT
TTATGCCAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGTTGGCTGGTGATGGCCC
AGCCATGGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTC
TATGGACATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGA
ACCCGGGTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGTTATGCGGATGCCTCATGGAGTGAGATTCGCCAGA
ATGCGCAAATAATGGTTGATACTCTTATTGCTTAA

Protein sequence : 
MMMKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINF
YGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscB CAA12190.1 SscB Virulence SPI-2 Protein 4e-63 100
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 5e-63 100
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 5e-63 100
sscB AAC28884.1 SscB Virulence SPI-2 Protein 4e-63 100
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-62 99
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 2e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_03335 YP_007901772.1 type III secretion system chaperone protein SscB VFG0504 Protein 2e-63 100