|
Name : STU288_03295 (STU288_03295) Accession : YP_007901764.1 Strain : Salmonella enterica U288 Genome accession: NC_021151 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaD Function : - COG functional category : - COG ID : - EC number : - Position : 697149 - 698360 bp Length : 1212 bp Strand : + Note : - DNA sequence : ATGGCATATCTCATGGTTAATCCAAAGAGTTCCTGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATG GCTGAATGAAGGTAACCTGTCACTGGGGGAGAAGGGATGCGATATTTGTATTCCGCTGGCTATAAATGAAAAAATTATTC TGAGAGAACAGGCAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAGAGTTAATGGCCGCAGATTTAATCCAAAT AAGCCGCTACCATCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGA TTATCAAATACCCGTTTCCAGATCAGGGTACTGGTGGTTGGCTGGCGTATTCTTGATTTTCATCGGTGGAATGGGTGTCC TGTTAAGTATTAGTGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATT CATTATGTGCGGGCGCAATGGAAAGAAGATGGCAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAA GGTGAGAGCGACTCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGGTACGAGAAGTGC AGGATGTTTTGATAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGGAGCGTGTTAATTCATGATGAT ATACAAATGGATCAGCAATGGCGCAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCA CTCTCATCAGTCTCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAA TGCGGCGCTCTTTTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAG AAAAAGGATCCCGCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCCCATGATGAAAGCAAGTATCTGCCTGCGCCAGT GGCTGGCTTTGTACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTAC CCAATGGGGGAGAAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATTATGATACTTTGATTAACTATCCATTA GATTTTAAGTGA Protein sequence : MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVDAGKARVRVNGRRFNPN KPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNI HYVRAQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALK KKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPL DFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaD | NP_460360.1 | virulence protein | Virulence | SPI-2 | Protein | 0.0 | 100 |
| ssaD | YP_216403.1 | secretion system apparatus protein SsaD | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_456133.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_805066.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| spiB | AAC44302.1 | SpiB | Virulence | SPI-2 | Protein | 7e-152 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STU288_03295 | YP_007901764.1 | type III secretion system protein SsaD | VFG0496 | Protein | 0.0 | 100 |
