Gene Information

Name : STU288_21560 (STU288_21560)
Accession : YP_007905391.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Resistance
Product : metal dependent hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4529263 - 4530906 bp
Length : 1644 bp
Strand : -
Note : COG2194 Predicted membrane-associated, metal-dependent hydrolase

DNA sequence :
ATGTTAAAGCGCTTTCTTAAAAGACCTGTTCTTGGGCAAATCGCCTGGCTTCTGCTTTTTTCCTTTTATATTGCCGTCTG
CCTGAACATTGCGTTCTACAAGCAGGTACTACAAGACCTACCGTTAAACTCGCTGCGCAATGTGCTGGTGTTTATTTCCA
TGCCGGTCGTCGCGTTTAGCGTGGTCAATAGTGTGCTGACGCTGGCCTCATTTATTTGGCTAAACCGACTGCTGGCCTGC
GTTTTTATTCTGGTCGGCGCTGCCGCGCAGTATTTTATTTTGACTTACGGCATCATCATCGATCGCTCCATGATCGCCAA
TATGATGGATACCACGCCCGCGGAAACCTTTGCGCTGATGACGCCGCAAATGGTGCTGACGCTGGGATTAAGCGGCGTTC
TGGCAGCCGTGATTGCCTTCTGGGTCAAAATCCGTCCGGCGACGCCGCGCTTACGTAGCGGGCTTTACCGCCTGGCCAGC
GTCCTGATCTCTATTTTATTAGTTATTCTGGTCGCCGCCTTTTTCTATAAAGATTACGCCTCGTTATTTCGAAATAATAA
ACAGTTGATCAAAGCATTAAGCCCATCGAACAGTATTGTCGCCAGTTGGTCATGGTATTCACATCAACGGCTGGCGAATT
TGCCGCTGGTACGCATTGGCGAGGATGCCCATCGCAATCCATTAATGCTGAAAGGCGATCGCAAAAACCTGACGATTCTC
ATCGTTGGCGAAACCTCGCGCGGCGATGATTTCTCTCTTGGCGGCTATCCGCGCGACACCAATCCGCGGCTGGCGAAAGA
CGATGTGATCTACTTCCCGCATACCACCTCTTGCGGTACGGCGACCGCGATCTCCGTTCCCTGCATGTTTTCTGATATGC
CGCGCAAACATTATGACGAAGAGCTGGCGCATCACCAGGAAGGGCTGCTGGATATTATCCAGCGCGCGGGGATTAACGTA
CTGTGGAATGATAATGACGGCGGCTGTAAAGGCGCATGCGATCGCGTTCCGCATCAAAATGTCACCGAGCTAAACCTGCC
CGGACAATGTATCGACGGCGAGTGCTACGATGAAGTGTTATTTCACGGTCTGGAAGACTATATCGACCATTTGAAAGGCG
ATGGCGTTATTGTATTACATACCATCGGCAGCCACGGCCCAACCTATTACAACCGTTATCCACCGCAGTTTAAAAAATTT
ACCCCAACCTGTGACACTAACGAAATTCAGAACTGTTCCCAAGAGCAGTTGATCAACACCTATGATAATACCGTGCTGTA
CGTGGACTATATTGTAGATAAAGCCATTAACCTGCTGAAATCTCATCAGGATAAATTCACCACCAGCCTGGTCTATCTTT
CCGATCACGGCGAATCATTGGGTGAAAATGGCGTTTATTTACACGGTTTGCCGTATTCCATTGCGCCGGATACGCAAAAA
CATGTCCCGATGCTCATTTGGCTTTCTAAAGATTATCAACAGCGTTATCAGGTGGATCAGGCCTGCCTGCAAAAACGGGC
GAGCACGCTGGATTATTCACAGGACAATCTTTTCTCAACCATGCTGGGATTAACCGGCGTACAAACGACGTATTACCAGG
CCGCAGATGATATTCTGCAACCGTGCAGGAGACTAAGCGAATGA

Protein sequence :
MLKRFLKRPVLGQIAWLLLFSFYIAVCLNIAFYKQVLQDLPLNSLRNVLVFISMPVVAFSVVNSVLTLASFIWLNRLLAC
VFILVGAAAQYFILTYGIIIDRSMIANMMDTTPAETFALMTPQMVLTLGLSGVLAAVIAFWVKIRPATPRLRSGLYRLAS
VLISILLVILVAAFFYKDYASLFRNNKQLIKALSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMLKGDRKNLTIL
IVGETSRGDDFSLGGYPRDTNPRLAKDDVIYFPHTTSCGTATAISVPCMFSDMPRKHYDEELAHHQEGLLDIIQRAGINV
LWNDNDGGCKGACDRVPHQNVTELNLPGQCIDGECYDEVLFHGLEDYIDHLKGDGVIVLHTIGSHGPTYYNRYPPQFKKF
TPTCDTNEIQNCSQEQLINTYDNTVLYVDYIVDKAINLLKSHQDKFTTSLVYLSDHGESLGENGVYLHGLPYSIAPDTQK
HVPMLIWLSKDYQQRYQVDQACLQKRASTLDYSQDNLFSTMLGLTGVQTTYYQAADDILQPCRRLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 1e-90 42
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 1e-90 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_21560 YP_007905391.1 metal dependent hydrolase BAC0485 Protein 7e-158 60