Gene Information

Name : STU288_18980 (STU288_18980)
Accession : YP_007904881.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3948965 - 3949582 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence : 
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTTCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAATCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTGCAATGGGCTGACAGTCTGGCAGACAGTGGCATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGGATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTCGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CGCTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Protein sequence : 
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
RFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rmbA AAD16953.1 RmbA Not tested SPI-3 Protein 4e-87 100
rmbA NP_462655.1 hypothetical protein Not tested SPI-3 Protein 5e-87 100
unnamed AAO49826.1 RmbA Not tested SPI-3 Protein 4e-86 99
rmbA NP_458174.1 conserved hypothetical protein Not tested SPI-3 Protein 2e-86 99
rmbA YP_218664.1 hypothetical protein Not tested SPI-3 Protein 1e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_18980 YP_007904881.1 hypothetical protein VFG0567 Protein 2e-87 100