Gene Information

Name : STU288_14650 (STU288_14650)
Accession : YP_007904021.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : transcriptional regulator InvF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3040932 - 3041582 bp
Length : 651 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence :
ATGTCATTTTCTGAAAGCCGACACAATGAAAATTGCCTGATTCAGGAAGGCGCGCTGCTTTTTTGCGAGCAGGCCGTTGT
CGCACCAGTATCAGGAGACCTGGTTTTTCGACCGTTAAAAATTGAAGTACTCAGCAAATTACTGGCATTTATCGATGGCG
CAGGATTAGTGGACACGACATATGCTGAATCCGATAAATGGGTTTTGCTGAGTCCTGAGTTTCGCGCTATTTGGCAAGAT
CGTAAACGCTGCGAGTACTGGTTTTTGCAGCAAATTATTACGCCTTCTCCGGCCTTCAATAAGGTACTGGCGCTGTTACG
AAAAAGCGAGAGTTACTGGTTGGTTGGCTATTTACTCGCTCAGTCAACCAGCGGCAACACGATGAGAATGCTGGGAGAAG
ACTATGGCGTTTCTTATACCCATTTTCGTCGTTTGTGCAGCAGAGCGTTGGGCGGAAAAGCGAAGAGTGAATTACGAAAC
TGGCGTATGGCGCAATCGCTGCTGAATAGTGTAGAAGGCCACGAGAACATCACCCAATTAGCCGTTAATCATGGTTACTC
ATCGCCTTCACATTTTTCTAGTGAGATCAAAGAGCTGATCGGCGTTTCGCCGCGGAAATTATCAAATATTATTCAATTGG
CAGACAAATGA

Protein sequence :
MSFSESRHNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKLLAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQD
RKRCEYWFLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNTMRMLGEDYGVSYTHFRRLCSRALGGKAKSELRN
WRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKLSNIIQLADK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invF NP_806502.1 AraC family transcriptional regulator Virulence SPI-1 Protein 4e-98 100
invF NP_461820.1 invasion regulatory protein Virulence SPI-1 Protein 4e-98 100
invF NP_457293.1 possible AraC-family regulatory protein Virulence SPI-1 Protein 4e-98 100
invF YP_217818.1 invasion protein Virulence SPI-1 Protein 2e-98 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_14650 YP_007904021.1 transcriptional regulator InvF VFG0560 Protein 1e-98 100