Gene Information

Name : STU288_14620 (STU288_14620)
Accession : YP_007904015.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : type III secretion system protein SpaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3033906 - 3034349 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence :
ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG
CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGATCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG
ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG
CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGCGAGCTGGAAAAGAAAAGGGAAGAGTTTCA
GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGATTCTATATCCAGC
GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA

Protein sequence :
MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR
QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQEEAESEEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invI YP_217812.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-40 100
invI NP_461814.1 needle complex assembly protein Virulence SPI-1 Protein 1e-40 100
spaM NP_457287.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 7e-40 99
spaM NP_806496.1 virulence-associated secretory protein Virulence SPI-1 Protein 7e-40 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_14620 YP_007904015.1 type III secretion system protein SpaM VFG0554 Protein 3e-41 100