Gene Information

Name : STU288_14610 (STU288_14610)
Accession : YP_007904013.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : type III secretion system protein SpaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3031985 - 3032896 bp
Length : 912 bp
Strand : -
Note : COG1886 Flagellar motor switch/type III secretory pathway protein

DNA sequence :
ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCG
GGAAGCGACGCTGGAATATCCGACGCGACAGGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCCTGGA
TTAAACCTGGGGACTGGCTTGAGCATGTCTCTCCCGCTCTGGCTGGGGCGGCGGTTTCTGCTGGCGCTGAGCACCTGGTC
GTTCCCTGGCTTGCTGCAACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA
CCCCGTACCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAGCATC
TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT
ACGCAGCGTTCGTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA
CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG
AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT
AAGAACGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGCTGAACTTAACGT
TGAAATTATGGCGAATGGTGTTTTGCTGGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG
AATGGCTGAGCGAGTCTGGTAATGGGGAATGA

Protein sequence :
MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLSDAEKRWSAWIKPGDWLEHVSPALAGAAVSAGAEHLV
VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSD
TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR
KNVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaO NP_461812.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 5e-128 100
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 2e-127 99
spaO NP_806494.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 2e-127 99
spaO YP_217810.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 5e-126 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_14610 YP_007904013.1 type III secretion system protein SpaO VFG0552 Protein 2e-128 100