|
Name : STU288_14525 (STU288_14525) Accession : YP_007903996.1 Strain : Salmonella enterica U288 Genome accession: NC_021151 Putative virulence/resistance : Virulence Product : type III secretion system needle complex protein PrgH Function : - COG functional category : - COG ID : - EC number : - Position : 3013992 - 3015170 bp Length : 1179 bp Strand : - Note : - DNA sequence : ATGGAAACATCAAAAGAGAAGACGATAACAAGCCCAGGGCCATACATAGTTCGATTACTTAACAGCTCACTGAACGGCTG TGAGTTTCCATTGCTGACAGGCCGAACACTCTTTGTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGTCAACTCCCTG ATATACCTGCCGATAGCTTTTTTATCCCGCTGGACCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATGCGACC GAAATTATACTCCATGAGCTGAAAGAAGGAAATTCTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGA ATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCGTGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGA ACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGCACTGGCCGGGTTTTTTATATTGGGAATTGGGACTGTGGGGACGTTA TGGATACTTAACTCGCCGCAGCGGCAGGCCGCAGAGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGTTTTCAGGTGTT GCCAGGCCGGGACAAAATGCTCTATGTCGCTGCGCAAAATGAAAGAGATACGTTGTGGGCTCGTCAGGTTTTAGCGAGGG GCGATTATGATAAAAATGCGCGAGTGATTAACGAAAACGAAGAAAATAAGCGTATCTCTATCTGGCTGGATACCTATTAT CCGCAGCTGGCTTATTATCGGATTCATTTCGATGAGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGAT GAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAGCTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACGTTGA TGGACGATGTTACCGCAGCAGGCCAGGCGGAAGCGGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAG GGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCGATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTA CCGCACATGGGGAGGACGCTATGTGCAGTTTGCGATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACG GGGCGGAAGGTTATATCAAAATGAGCCCAGGCCATTGGTATTTCCCAAGCCCACTTTAA Protein sequence : METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAT EIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYY PQLAYYRIHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgH | NP_461795.1 | needle complex inner membrane protein | Virulence | SPI-1 | Protein | 0.0 | 100 |
| prgH | NP_457268.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| prgH | NP_806477.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| prgH | YP_217793.1 | cell invasion protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STU288_14525 | YP_007903996.1 | type III secretion system needle complex protein PrgH | VFG0536 | Protein | 0.0 | 100 |
