Gene Information

Name : STU288_14495 (STU288_14495)
Accession : YP_007903990.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Unknown
Product : type III secretion system effector protein OrgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3010989 - 3011441 bp
Length : 453 bp
Strand : -
Note : -

DNA sequence :
GTGATACCGGGTACGATTCCGACTTCTTATTTGGTCCCGACAGCAGATACTGAAGCGACGGGTGTGGTTTCGTTGAGTGC
CAGGGCCGCTATGCTGAATAATATGGATAGCGCGCCTTTAAGCAATGGCGGCGACGTTGATCTTTATGATGCATTCTACC
AACGACTTTTGGCGCTTCCTGAGTCAGCCTCTTCTGAAACGCTTAAAGATAGCATTTATCAAGAGATGAATGCCTTCAAA
GATCCTAACAGTGGTGATTCGGCTTTTGTTTCTTTTGAGCAGCAAACGGCTATGCTACAAAACATGTTAGCAAAAGTTGA
ACCGGGCACCCATTTATATGAGGCTTTAAACGGGGTATTAGTTGGTTCAATGAACGCACAGTCACAAATGACCTCCTGGA
TGCAGGAGATTATTTTATCGGGCGGGGAAAACAAAGAGGCAATTGACTGGTGA

Protein sequence :
MIPGTIPTSYLVPTADTEATGVVSLSARAAMLNNMDSAPLSNGGDVDLYDAFYQRLLALPESASSETLKDSIYQEMNAFK
DPNSGDSAFVSFEQQTAMLQNMLAKVEPGTHLYEALNGVLVGSMNAQSQMTSWMQEIILSGGENKEAIDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgC NP_461789.1 hypothetical protein Not tested SPI-1 Protein 6e-64 100
SC2800 YP_217787.1 hypothetical protein Not tested SPI-1 Protein 2e-63 99
t2770 NP_806471.1 hypothetical protein Not tested SPI-1 Protein 4e-63 98
STY2989 NP_457262.1 hypothetical protein found within S. typhi pathogenicity island 1 Not tested SPI-1 Protein 4e-63 98