Gene Information

Name : STU288_13765 (STU288_13765)
Accession : YP_007903844.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Unknown
Product : major capsid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2859879 - 2860961 bp
Length : 1083 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGTTGGCGCGCCTGAACAGTGTGGAGGTTGAAGAACT
CTCCAGCAAGTTTACCGTGGAGCCGTCCGTGCAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACGC
TGATTAACATCACGCCGGTCACTGAACAGTCAGGACAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC
GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAACAGACCAACTT
TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG
TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAAC
CCGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATCATGTTATGGGCAGTAAAAC
CGCAGAAGACGGCACCACTACTGCGGAGCCGGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAACCTTGACGCTGTGGTGA
TGGATGCCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGATGAGCTGGTTGTTGTCTGTGGTCGTGAACTGCTG
TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAAAAAATTGCCGCCGATATGATCATCAGCCAGAA
ACGTATGGGCGGCCTGCAGGCTGTGCGTGCGCCTTTCTTCCCGGCAAATGCATTGTTAATCACCCGACTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCTGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCC
GTTAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCACTGGTGGAAAACATCGAAATGAGTGATTTCACTCCGCC
TGCCGCACCTGTTGTAGCCGCAGAGTCAGGAAATGGAGAGTAA

Protein sequence :
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 1e-144 98
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 1e-144 98
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 1e-70 52