Gene Information

Name : STU288_09455 (STU288_09455)
Accession : YP_007902990.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1974183 - 1975460 bp
Length : 1278 bp
Strand : -
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAACGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC
TGAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAACGTATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGTGCAAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCGGCCTCACTTCCCCGTGAAACCCGGGTTATCCGGCCGGAAGAGGAATGCTGTCCTGCCT
GTGGTGGTGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACAGGCCTGTTGCCGGTGCGACCATATCGTGCAGGCACCAGTACCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTCACCGGGAAATATGCAGACCATCTGCCGTTATACCGCCAGTCAGAAA
TATACCGTCGTCAGGGAGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAGCCG
CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC
GGGCAGCGGTAAAACCCGGACAGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGG
CGGTCTGGTTCGCGTACAGTCCGGACCGGAAAGGTATCCATCCACAAAATCACCTGGCCGGTTACAGCGGTGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGCCCGGAG
AAAAATCCACGATGTGCATGCAAGAGCGCCCACCTACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA
TCGAGGCAGAGGTCCGGGGCTGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGCAGTCA
CTGTATGACTGGATACAGCAACAGATGAAACACTGTCGCGTCACTCAGATACGGCAAAAGCGTTCGCATACCTGCTGA

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER
ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE
TQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQS
LYDWIQQQMKHCRVTQIRQKRSHTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 7e-176 100
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-128 97
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-117 63
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-117 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-89 60
tnp AEA34686.1 transposase Not tested Not named Protein 3e-94 59
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 6e-85 58
unnamed AAL08460.1 unknown Not tested SRL Protein 4e-92 58
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-93 58
unnamed AAC31494.1 L0015 Not tested LEE Protein 4e-93 58
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-93 58
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-93 58
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-93 58
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-92 58
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-92 58
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-93 58
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-92 58
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-93 58
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-78 55
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 4e-75 51
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 9e-88 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_09455 YP_007902990.1 hypothetical protein VFG1513 Protein 2e-128 97
STU288_09455 YP_007902990.1 hypothetical protein VFG1516 Protein 4e-85 58
STU288_09455 YP_007902990.1 hypothetical protein VFG1051 Protein 3e-92 58
STU288_09455 YP_007902990.1 hypothetical protein VFG0793 Protein 2e-93 58
STU288_09455 YP_007902990.1 hypothetical protein VFG1736 Protein 2e-79 55