Gene Information

Name : AvCA6_07010 (AvCA6_07010)
Accession : YP_007896786.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Resistance
Product : D-isomer specific 2-hydroxyacid dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 666085 - 667092 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATCGTGATGTTCAGTGCGCAACCTTACGACGAGCGCTCTTTCGACGAGGTATTGCAGCGCGACTACGCTTCCCG
CGGCTTCGAACTGGTCTACCAGAAGGCCGCGCTATCCGCGCAGACCGTGGCGCTGGCCCAGGGGGGCGAAGCGGTGTGCG
CCTTCGTCAACGACCAGCTCGATGCCGCGGTGCTGGAAACCCTGCACGGCTATGGCGTGCGAGCGATCCTGCTGCGCTGC
GCGGGGTTCAACCATATCGACCTGGAAGCCGCCCGCAGCCTGGGGCTGTTCGTCGCCCGGGTGCCGGCCTATTCGCCGGA
AGCGGTGGCCGAGCACACCATCGCCCTGATCCTGACCCTCAACCGGCACACCCACCGTGCCTACAACCGGGTGCGCGAGG
GCAACTTCATGCTCGACGGCCTGCTCGGCTTCAACCTGCACGGCAAGACCGTGGGTCTGATCGGCACCGGCCAGATCGGC
CTGGCCACGGCACGTATCCTCAAGGGCTTCGGCTGTCGGGTGCTCGGCCACGATCCGTACCGGACGGCCGAGTTCGCCGC
CCTCGGCGACTACGTGGAGCTCGACGTGCTGCTCGCCGAATCCGACGTGGTCAGCCTGCACTGTCCGCTGAGCGAGGCCA
CCTGGCACCTGATCGACGCCGCCCGCCTGGCGCGGATCAAGCGCGGCGCCATGCTGGTCAACACCTCGCGCGGCGCGCTG
ATCGACACCCACGCGGTGATCGCCGCGCTGAAATCGCGGCGCCTCTCGGCACTGGCCATCGATGTCTACGAGCAGGAAAG
CCAGTTGTTCTTCCACGACCGCTCCTCGGACATCATCGACGACGACGTCTTCACGCGGCTGATGACCTTTCCCAACGTGA
TCGTCACCGGCCACCAGGGCTTCTTCACCGCCGAGGCGCTGCGCGAGATCGCCGAGACCACCCTGCGCAACCTCGACTGC
TACGCGAGCGGCCGCGCCTGCGGGAATGCGCTGGCGGGCGATGGCTGA

Protein sequence : 
MKIVMFSAQPYDERSFDEVLQRDYASRGFELVYQKAALSAQTVALAQGGEAVCAFVNDQLDAAVLETLHGYGVRAILLRC
AGFNHIDLEAARSLGLFVARVPAYSPEAVAEHTIALILTLNRHTHRAYNRVREGNFMLDGLLGFNLHGKTVGLIGTGQIG
LATARILKGFGCRVLGHDPYRTAEFAALGDYVELDVLLAESDVVSLHCPLSEATWHLIDAARLARIKRGAMLVNTSRGAL
IDTHAVIAALKSRRLSALAIDVYEQESQLFFHDRSSDIIDDDVFTRLMTFPNVIVTGHQGFFTAEALREIAETTLRNLDC
YASGRACGNALAGDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_07010 YP_007896786.1 D-isomer specific 2-hydroxyacid dehydrogenase AF310956.2.orf4.gene Protein 1e-40 41
AvCA6_07010 YP_007896786.1 D-isomer specific 2-hydroxyacid dehydrogenase NC_005054.2598279.p0 Protein 7e-38 41
AvCA6_07010 YP_007896786.1 D-isomer specific 2-hydroxyacid dehydrogenase NC_014475.1.orf2.gen Protein 7e-38 41