Gene Information

Name : AvCA6_45960 (AvCA6_45960)
Accession : YP_007900538.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Unknown
Product : Transposase, IS4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4668287 - 4669480 bp
Length : 1194 bp
Strand : +
Note : -

DNA sequence :
ATGCAGACCGTCCAATTCTTGCACGCCGCCTTCGCCGAGGCACTCCCCACGATCCATGCCCGCCGTCTCGAAGCCTTGAT
GGCGGCGGTAGCCGCCCTGCTGCAGGGCCGCCGCCTGACCCTGACCGCACTGGGGCGCTCTCTGCCCGGCTCTGCCTGGC
CCAGGCAGGCGATCAAGCGGATCGACCGCCTGCTCGGCAACCGGCAGCTTCAAGCCGAACGTGGCTTGTTCTATTGGGTC
ATGCTCCGCGCCCTGCTGGGCTCGCTCAGGCATCCGTTGATCCTGGTGGACTGGTCGCCGATCGATGCCACCGGCAACCT
GTTCCTGCTGCGAGCGTCGATGCCGCTGGCCGGGCGCTCGTTGCCGGTCTGCGAAGTCGTCCCCCCGCGCGAAGGCTGCC
CGCGTTGCCAGCGGCGCCTGCTCGAGGCCCTGGCGGCGATGCTGCCGGCCGACTGCACGCCCATCCTGGTCACCGATGCG
GGCTTCCGGCGGCCCTGGTTCCAGGCCGTCGAGGCGCAGGGCTGGCATTACGTCGGCCGCGTGCGCAACCGCGACCTGTG
CCGGCTCGGCGAGCAGTCGTGGCAGCCGGTGAAAAGCCTGTATGCCCTGGCCTCGGCGTCGCCGAAACGGCTCGGTCGTC
TCGAGACGACGCGCTCGGCGCCCTGGTCCACCCAGCTCTGCGCGGTGAAGCATCCATCGCGGGGGCGCAAGCACCGGCGC
GTCACCGGACGCGTGGCCCGGGACAAACGCAGCCGGCAGAACGCCCGGCGCGAAAGCGAGCCCTGGCTGCTGGCCAGCAA
CCTGCCCGAGGCGCAGTGGAGTGCCGCGCAGATCGTGGCGATCTACAGGCGGCGCAGGCAGGTCGAGGAAGGCTTCCGCG
ACCTGAAGAGCCATCGGCTGGGGATCGGTCTGGGGCTGCGTCGCAGCCGCTGCCCGCGGCGCATCGAGATCCTGCTGCTG
ATCGCCGTGCTGGCCAACTACGCGCTGTGCCTACTGGGCCTGCAGGCGCGGGAGGCGGGGCACGAACGGCATTTCCAGAG
CAACAGCCTCAAGGACCGGCACGTGTTGTCGCTGTGGCGGCTGGGGCTGGAGTATGCACGCCGTTACGCGGGAGACCTTT
CCCGGGAGAAGCTACGGAATCTGGAGCTGGCCCTGCGGCGGGAGGTCCACCGGCAAGCGCTGGAGCTGGGGTGA

Protein sequence :
MQTVQFLHAAFAEALPTIHARRLEALMAAVAALLQGRRLTLTALGRSLPGSAWPRQAIKRIDRLLGNRQLQAERGLFYWV
MLRALLGSLRHPLILVDWSPIDATGNLFLLRASMPLAGRSLPVCEVVPPREGCPRCQRRLLEALAAMLPADCTPILVTDA
GFRRPWFQAVEAQGWHYVGRVRNRDLCRLGEQSWQPVKSLYALASASPKRLGRLETTRSAPWSTQLCAVKHPSRGRKHRR
VTGRVARDKRSRQNARRESEPWLLASNLPEAQWSAAQIVAIYRRRRQVEEGFRDLKSHRLGIGLGLRRSRCPRRIEILLL
IAVLANYALCLLGLQAREAGHERHFQSNSLKDRHVLSLWRLGLEYARRYAGDLSREKLRNLELALRREVHRQALELG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 1e-51 41
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 5e-52 41
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 4e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_45960 YP_007900538.1 Transposase, IS4 VFG0647 Protein 4e-52 41