Gene Information

Name : AvCA6_41880 (AvCA6_41880)
Accession : YP_007900147.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Unknown
Product : Transposase IS3/IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4222277 - 4222561 bp
Length : 285 bp
Strand : -
Note : -

DNA sequence :
ATGAAACCAACCCGTATCCGCCACTCCCAAGCCTACAAGGACGAAGCGCTGGCCTTGGCCGAACGGATTGGCGTCAGCAA
AGCGGCCGAACAGCTTGGGCTGCCCCCCTCCCAGCTCTATGGCTGGCGGAGCAGGAAACAGCAGGCCCAGACCAGCAGCG
AGCGCGAGCAGTTGTTGGCCGACGAAAACGCCCGCCTCAAACGGCTGTTGGCCGAACAGTCCGAGGAGTTGGCCATCGTA
AAAATCTATGGTCACCCCCGTTTTTGCAATAGTGATCAGCGATGA

Protein sequence :
MKPTRIRHSQAYKDEALALAERIGVSKAAEQLGLPPSQLYGWRSRKQQAQTSSEREQLLADENARLKRLLAEQSEELAIV
KIYGHPRFCNSDQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 2e-13 60
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 2e-13 60
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 9e-15 60
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-12 60
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-12 60
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 6e-15 60
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 6e-15 60
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 6e-15 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_41880 YP_007900147.1 Transposase IS3/IS911 VFG1632 Protein 7e-13 60
AvCA6_41880 YP_007900147.1 Transposase IS3/IS911 VFG0603 Protein 6e-14 60