Gene Information

Name : AvCA6_41400 (AvCA6_41400)
Accession : YP_007900104.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4174896 - 4175849 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCACCGCCAGACCGAAGATCGCCATCAGCGCCTGCCTGCTCGGCGAACGGGTGCGCTTCAATGCCGGCCACAAGGA
GTCGCGGCTGTGCAGCCGCGAGTTCGCCAGATATTTCGACTTCGTTCCGCTCTGCCCGGAAATGGCCATCGGCCTCGGCA
CACCGCGCCAGCCGATCCGCCTGGTGGGCGATCCGACCAGCCCGCGGGCGGTCGGCACGCGTGACGCCACGCTCGATGTC
GGCACACCGCTCGCCGCCTATGGCGAACGCATGGCCGGCGAGCTGGACGACATCGACGGCTTCATCTTCATGCAGAAATC
CCCGTCCTGCGGCCTGGAGCGGGTCAAGGTCCACCAGGCCGACAGCCATTCCGCCGAAGGCACTGGTCGCGGCCTGTTCG
CTGCCGCCTTCTGCGCGCGCCGCCCGGAGCTGCCGGTGGAAGAAGAGGGCCGCCTGCACGACCCGGTGCTGTGCGAGAAC
TTCGTGACCCGGGTGTTCGTGCATGCCGAATGGCGCCAGTCGCTCGGCCAGAACCTGAGCCGCCGGACGCTCCTCGACTT
CCATGCCCGCCACAAGTACCTGCTGATGGCCAGCCATCCGCAGCAGTACCGGGCCCTCGGCCGGCTGCTCGGCGACCTCG
GCCGGCATGCGCCGGAGGAGTTCGGCCCGTGCTATTTCGCCCGTTTGATGGCCGCGCTGCGCCGATGCGCCAGCCGTGGC
GGCCACGGCAACGTGCTGCAGCACCTTTGCGGCTACCTGCGTCCGGCCCTGGAACCGGGCGAGCGCGCGGAACTCCAGCG
GCTGATCGAGCAGTACCGCCTCGGTATGCTGCCCCTGGTGGTGCCCTTGACGCTGCTCAAGCACCATTTCCGCCGCCATC
CCCATCCCTACGTGGCCCGGCAGGTCTACCTGCAGCCGCATCCCGAAGAACTCGGCTTGCGCAACGCGATTTGA

Protein sequence : 
MSTARPKIAISACLLGERVRFNAGHKESRLCSREFARYFDFVPLCPEMAIGLGTPRQPIRLVGDPTSPRAVGTRDATLDV
GTPLAAYGERMAGELDDIDGFIFMQKSPSCGLERVKVHQADSHSAEGTGRGLFAAAFCARRPELPVEEEGRLHDPVLCEN
FVTRVFVHAEWRQSLGQNLSRRTLLDFHARHKYLLMASHPQQYRALGRLLGDLGRHAPEEFGPCYFARLMAALRRCASRG
GHGNVLQHLCGYLRPALEPGERAELQRLIEQYRLGMLPLVVPLTLLKHHFRRHPHPYVARQVYLQPHPEELGLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-54 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-54 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-54 42
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-54 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 4e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_41400 YP_007900104.1 hypothetical protein VFG0490 Protein 2e-54 42