Gene Information

Name : AvCA6_36580 (AvCA6_36580)
Accession : YP_007899636.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Unknown
Product : Relaxase-related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3718383 - 3720278 bp
Length : 1896 bp
Strand : +
Note : -

DNA sequence :
ATGGAGCGCCCCATGTCCCTCCTCACCTGGCTCGGCCGGAAGTCGGCCGAACCCACGTCAGAAGCGCCTTCGCAGGGCTT
CCACTCGCCGGCCCGCGCCGCCGTCCTCTTCGACACCCCGCGCCGCCAGCACCTGCTGGAGAACATCGGGCGCCGCGCTT
CGCTGTCCCGCCAGCAGTTCGACGCACTCTACCGCCAGCCGCTGGAGCGCTTCGCCGAGCTGGTCCAGTTGCTCCCCGCC
TCGGAGAACCATCACCACGCCCATCTCGGCGGTCTGCTGGACCACGGCCTGGAGATCGTGGCCTATGCCCTGAAGATCCG
GCAGACCTACCTCCTGCCGATCGGCGCGCCGCCGGAATCCCAGTCCGCCCAGGCCGAGGCCTGGTCCGCGGCCGCCGCCT
ACGGTGCACTGCTGCACGACCTCGGCAAGGTCGCCGTCGACGTGCAGGTCGAGCTGCAGGGCGGTACGGCCTGGCATCCC
TGGCATGGCCCCATTACCCGGCCCTACCGCTTCCGCTACGTGAAAGGCCGCGAGTACCCACTCCACGGCGCGGCCTCGGC
GCTGCTCTACGCGCAGATCCTCGACCGGAACATCCTGGACTGGCTCAGTGGCTTTCCCGAGCCCTGGAGACTGCTGATCT
ACGCCCTGGCCGGGCAGTACGAGCACGCCGGCATCCTCGGCGAGATCGTGGTCAAGGCCGACCAGGCTTCCGTCGCGCAA
GCGTTGGGCGGCAATCCCGAGCGGGCCCTGGCGGCGCCCAAGCAGTCGTTGCAGCGTCAACTGGCCGAAGGCCTGCGCTA
CCTGGTGCGGGAGAAGTTCAAGCTGAACCAGCCCGATGGCCCTGCCGATGGCTGGCTGGCCCAGGATGCCTTGTGGCTGG
TGAGCAAGCCGGCGTCCGACCAGTTGCGAGCACATTTGCTGGCCCAGGGGATCGAGGGCGTACCCGGCTCGAACGCCCCG
TTCTTCAACATGCTGCAGGACCAGGCAATCATCCAGACCAACGCCCAGGACAAGGCGATCTGGCGGGCGACGATCGACAA
CGGCCGTGGCTGGCGGAATACCTTCACCCTGCTGAAGATCGCCCCGGCGCTGGTCTGGCCAGACCCGAAAGACCGGCCCG
ATGCCTATGCCGGAAGTCTCACGCTGGAGCAGGACGAGGGCGCCGCCGCCCCTGCGGCCGAAACGGTCTGCCCGGTTCCG
GATGAGCCCATCGCCGCCGGCGCGCAGCAGCCCTGCCCGCCCGAATCCCTGGCTCCGCCCCCCCGCAAGGCCGTGCAGCC
GGCGCCGGCCGAGGCCTCGAGGATCGGCACCGCCGAGGTGGACGAGCTATTGTCGCTTTACAGTAATATCACTATGCCAC
TAGAGGAGTTAAACACTCGCCCCGGCCCCACGGCGGCCCCTCCCGCGATCACGCTGGAGCAGGCTCAAGATCCTTCCGAG
ACCCCCGTCGGGTCTCCCGCACCTGAATACACGACCACGATGTCTACCAGTAGCGACACGCTGGGACAGGGATTCATTGC
CTGGCTGAAAGCAGGAATCACATCCCGCCGCATGATCATCAACGACGCGAAGGCCCTGGTTCATACGGTTGACGGCACGG
CGATGCTGGTCACCCCGGAAATCTTCAAGCGCTACGTCAGGGAACACCCGGAACTGGAACAGCAAGCCAGGACGCGGGAC
AGCGAGGCCTGGCAGCTCGTGCAACGCGCCTTCGAGAAACAGAAACTGCACCGCAAGACGCCGAAGAGCTTGAACATCTG
GACATGCACGGTCGTCGGGCCGCGCAGATCGACGCAACTGCGCGGCTACCTCCTGAGAGATCCGCGAACCGTCTTCAACG
AGGTGCCGTTCGACAATCCCAGCCTGTCGCTGGCGACCGGGGAGGCAGTGGAATGA

Protein sequence :
MERPMSLLTWLGRKSAEPTSEAPSQGFHSPARAAVLFDTPRRQHLLENIGRRASLSRQQFDALYRQPLERFAELVQLLPA
SENHHHAHLGGLLDHGLEIVAYALKIRQTYLLPIGAPPESQSAQAEAWSAAAAYGALLHDLGKVAVDVQVELQGGTAWHP
WHGPITRPYRFRYVKGREYPLHGAASALLYAQILDRNILDWLSGFPEPWRLLIYALAGQYEHAGILGEIVVKADQASVAQ
ALGGNPERALAAPKQSLQRQLAEGLRYLVREKFKLNQPDGPADGWLAQDALWLVSKPASDQLRAHLLAQGIEGVPGSNAP
FFNMLQDQAIIQTNAQDKAIWRATIDNGRGWRNTFTLLKIAPALVWPDPKDRPDAYAGSLTLEQDEGAAAPAAETVCPVP
DEPIAAGAQQPCPPESLAPPPRKAVQPAPAEASRIGTAEVDELLSLYSNITMPLEELNTRPGPTAAPPAITLEQAQDPSE
TPVGSPAPEYTTTMSTSSDTLGQGFIAWLKAGITSRRMIINDAKALVHTVDGTAMLVTPEIFKRYVREHPELEQQARTRD
SEAWQLVQRAFEKQKLHRKTPKSLNIWTCTVVGPRRSTQLRGYLLRDPRTVFNEVPFDNPSLSLATGEAVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-180 64
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 2e-179 64
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 5e-180 64
pph99 CAI36140.1 predicted HD-superfamily hydrolase Not tested PPHGI-1 Protein 7e-151 61
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 7e-140 52
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-139 51