Gene Information

Name : AvCA6_36480 (AvCA6_36480)
Accession : YP_007899626.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Unknown
Product : transposase, helix-turn-helix, Fis-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3711914 - 3712939 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence :
ATGTTGACCCAGGAGCAAGCAGTGGAGATCAGAGTATTAGCCCGTCAAGGGCACAGCATTCGGCAGATCGCCAAGATGCT
GGGCGTGTCCCGCAACACCGTCCGGCGCTACCTCAAGGAGCCCACCGTCCCGCGCTACTCGCCGCGAGACCCCAGGCCCA
CCAAGCTCGACCCCTTCCATGACTATCTGCGCGAGCGGGTGAAGCAGGCGCATCCGCTCTGGCTGCCGGCCACCGTGCTG
CTGCGCGAGATCCGCGAGCAAGGCTACCAGGGCGGCGCTTCCCAGTTGCGCGCCTGGCTGGCCAGACTCAAGCTGAGCAG
GCCGGACGATGGCCCGGCGGTGCGCTTCGAGACCGAGCCCGGCCAGCAGATGCAGGCTGACTTCGTGGTTTTCCGCCGCG
CCAAATCACCGTTGTCGGCCTTCGTCGCCACCCTGGGCTACAGCCGGATGACTTACGTCCATTTCGTGCCGGACGAGTCG
TTCGACTCGGTGCATGACGCGTTGCTGCTGGCCTTCGACTACTTCGGCGGTGTCCCGCAGCACGTGCTGTTCGACAACAT
GAAGACCGTCGTGCTGGAACGCGATGCCTATGGCGACGGCAGCCACCGCTTCCACCCCGGGCTGCTTCAACTGGCTGACG
ATCTGGGCTTCCACATCCGCCTGTGCCGCCCCTACCGGGCGCGTACCAAGGGCAAGGTCGAGCGCTTTAACCGCTACCTG
CGCGAGAGCTTCTACAACCCGTTGCACAGCCGGGTGAAGGCCGCCGGTCTGCTGGTGGATTGCGGCACAGCCAATCGGCT
GGTCGGCGACTGGCTGGCCGAGGTCGCCAACGTGCGCGTGCATGCCACGCTCGGTGAACGCCCGATCGATCGCTGGCGTC
ACGAGCAAGGCCAACTGACACCCCTGCCGCAGGCTCTGCGGCGGGCCTGGGGGCCGTTGCTGGGGGAGCGGCCAGGGCCC
GTACCGCATGAGTCGTTGCAGCACCCGCTGTCGGTCTACGAGTCGATCCGGGAGGCCTGCGCATGA

Protein sequence :
MLTQEQAVEIRVLARQGHSIRQIAKMLGVSRNTVRRYLKEPTVPRYSPRDPRPTKLDPFHDYLRERVKQAHPLWLPATVL
LREIREQGYQGGASQLRAWLARLKLSRPDDGPAVRFETEPGQQMQADFVVFRRAKSPLSAFVATLGYSRMTYVHFVPDES
FDSVHDALLLAFDYFGGVPQHVLFDNMKTVVLERDAYGDGSHRFHPGLLQLADDLGFHIRLCRPYRARTKGKVERFNRYL
RESFYNPLHSRVKAAGLLVDCGTANRLVGDWLAEVANVRVHATLGERPIDRWRHEQGQLTPLPQALRRAWGPLLGERPGP
VPHESLQHPLSVYESIREACA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAA21403.1 - Not tested HPI Protein 3e-78 50
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 1e-77 50
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 1e-77 50
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 1e-77 50
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-77 50
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 2e-78 50
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 3e-78 50
api83 CAF28557.1 transposase Not tested YAPI Protein 2e-78 50
y2411 NP_669718.1 transposase Not tested HPI Protein 3e-78 50
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-78 50
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 3e-78 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_36480 YP_007899626.1 transposase, helix-turn-helix, Fis-type VFG1626 Protein 6e-78 50
AvCA6_36480 YP_007899626.1 transposase, helix-turn-helix, Fis-type VFG1607 Protein 6e-78 50
AvCA6_36480 YP_007899626.1 transposase, helix-turn-helix, Fis-type VFG1514 Protein 6e-78 50
AvCA6_36480 YP_007899626.1 transposase, helix-turn-helix, Fis-type VFG1461 Protein 1e-78 50