Gene Information

Name : AvCA6_36200 (AvCA6_36200)
Accession : YP_007899598.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Unknown
Product : Plasmid hypothetical protein, RAQPRD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3686877 - 3687233 bp
Length : 357 bp
Strand : +
Note : -

DNA sequence :
GTGAATCGCTATCCGCTCCTCCTTGCCTCTCCCTGTCGACTGGCCCGCCACGGCCTGCTCGCCATCGCCGGCTGCGTGCT
GGTCGCACCCCAGGCGAACGCCGCGAGTGCGTCCGAGCAGGCCCACATCGAGGTCATGATCCGCCAGTTGAATGCCCTGG
AGGAGTCGGCCAGGCGCAGCGCCCGGATCGCCGACGAGCCAGGCCAGCGCTACTTCTTCGACTACCGGCGCCTGGCCACC
GACATCCAGCGTATCCGCCAGGGCCTCCAGGACTATCTCACCCCCAGCCGTGCCCAGCCCAGGGACCCGGCCGATCTCTC
GGGCAGCTACACGCTCAACGGAGGCCGGATGCCATGA

Protein sequence :
MNRYPLLLASPCRLARHGLLAIAGCVLVAPQANAASASEQAHIEVMIRQLNALEESARRSARIADEPGQRYFFDYRRLAT
DIQRIRQGLQDYLTPSRAQPRDPADLSGSYTLNGGRMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-30 76
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 1e-29 75
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 4e-30 75
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 1e-23 60